Non-Coding RNA Search

Lng1-LNG010003G07

Sequence:


               
               TGGATATGGTTTGACTGTTTTCTACATGAATGTTTGTGACCCTATCATATATCTTTTTTG
CTTTGTTTTTCAGAATAGAAATGTACTGTCGAGAACTGACAGAGAGGTTTGAGGATGTTT
GGATAGTCTCTGGACCGCTGACGTTACCTCAGACTGGAAGTGATGGAAAGAAAAATGTTA
GTTACCAGGTGATTGGCAAGGACAACGTGGCAGTGCCCTCGCACCTCTACAAGGTGATCC
TGGCACGCAGAAGCCCAGAGTCTGCTGAGCCCCTGGCACTGGGGGCCTTTGTGGTGCCCA
ATGAGGCCATCGGCTTCCAGCCTCAATTGAGTGAGTTCCAGGTGAGCCTGCGGGATCTGG
AGAAGTTGTCAGGCCTGGTGTTTTTCCCTCATCTGGACAGAACTAGTGACATCAGAAACA
TCTGTGAGGTGGACACCTGTAAGCTCCTGGATTTCCGGGAGTTCACTTTGTACCTGAGCA
CAAGAAAGATTGAGGGAGCCCGATCAGTACTCAGACTGGAAAAGGTCATGGAAAATTTGA
GGAGCGCAGGCATCGAACCCGACGAGTACTTCATGACTCGCTACAAGAAGAAACTTGAAG
AACTCAGAGCCCTGGAGCAGTCGGAAGTCCTGGAGAGAAAGCCCTCGTAGTTCTTAGCCC
AGAAATGTGACGTCATGTGCCATGAAGCAGGTGCGGCCTCTTTAGGCTACTGTGTTTTAG
TGGCTCTACTTTAAAAAGATGGAATCCTAAACTTAAGACTAAATTTTggagttcccattg
tggcgcagtggaaacgaatccgactacaaaccatgatgttgagaatttgatccctgg

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGATATGGTTTGACTGTTTTCTACATGAATGTTTGTGACCCTATCATATATCTTTTTTG
CTTTGTTTTTCAGAATAGAAATGTACTGTCGAGAACTGACAGAGAGGTTTGAGGATGTTT
GGATAGTCTCTGGACCGCTGACGTTACCTCAGACTGGAAGTGATGGAAAGAAAAATGTTA
GTTACCAGGTGATTGGCAAGGACAACGTGGCAGTGCCCTCGCACCTCTACAAGGTGATCC
TGGCACGCAGAAGCCCAGAGTCTGCTGAGCCCCTGGCACTGGGGGCCTTTGTGGTGCCCA
ATGAGGCCATCGGCTTCCAGCCTCAATTGAGTGAGTTCCAGGTGAGCCTGCGGGATCTGG
AGAAGTTGTCAGGCCTGGTGTTTTTCCCTCATCTGGACAGAACTAGTGACATCAGAAACA
TCTGTGAGGTGGACACCTGTAAGCTCCTGGATTTCCGGGAGTTCACTTTGTACCTGAGCA
CAAGAAAGATTGAGGGAGCCCGATCAGTACTCAGACTGGAAAAGGTCATGGAAAATTTGA
GGAGCGCAGGCATCGAACCCGACGAGTACTTCATGACTCGCTACAAGAAGAAACTTGAAG
AACTCAGAGCCCTGGAGCAGTCGGAAGTCCTGGAGAGAAAGCCCTCGTAGTTCTTAGCCC
AGAAATGTGACGTCATGTGCCATGAAGCAGGTGCGGCCTCTTTAGGCTACTGTGTTTTAG
TGGCTCTACTTTAAAAAGATGGAATCCTAAACTTAAGACTAAATTTTggagttcccattg
tggcgcagtggaaacgaatccgactacaaaccatgatgttgagaatttgatccctgg

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61840945|ref|XP_602665.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61840945|ref|XP_602665.1|

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               336-535, + strand, RNAz p=0.96812

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               336-535, + strand, RNAz p=0.96812

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               178-766, gnl|bosTau2|chr22 (9246794-9247375)
               

               
               178-766, gnl|Hg17|chr3 (38540385-38541169)
               

               
               178-766, gnl|Mm7|chr9 (119142569-119143042)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               178-766, gnl|bosTau2|chr22 (9246794-9247375)
               

               
               178-766, gnl|Hg17|chr3 (38540385-38541169)
               

               
               178-766, gnl|Mm7|chr9 (119142569-119143042)

	178-766, gnl\|bosTau2\|chr22 (9246794-9247375)
	178-766, gnl\|Hg17\|chr3 (38540385-38541169)
	178-766, gnl\|Mm7\|chr9 (119142569-119143042)