Non-Coding RNA Search

Lng1-LNG010005C11

Sequence:


               
               TTTGATATATATTATTGATTGTTCTCAATGAAATAGTTTCCATAAGATTTCGCTCCTTCA
GGATGTCTAAAACATAATTACCTTAAAATTTATCTTCCCATCTTAAATATTTTACACTTG
TCCTTGAGCCAGCTGCATGATCTTTAGAAAGCCTCCTGTTCTGAAGTATGAAGACAGTCT
GCATTGCCGTTCTGTCCTGGGCATGCTGTAAGTTTTTCTGTGAACATCTTTGCCTTCACA
TCTAATGGAAAAGAATTTGCAGTGGCAGCATTTGATGTTTCCCAAGAGAAAGGGTGACTT
TTTGAGGTCATGTTGTACCTTTGGATCTACAAACCTTAGAAGCCATTATCTTAAAATGAT
ATAAATTCGGTTACAAAATGGAAAGATGATTGCATGATTAATGGAGGTTAATAAAGATCA
TTGAAATCCTAGCCTGGATGAGGCCATCAGAAACTATTTAATCCAATTTCCTTTGGCTCC
AGACAGGCCACTTGGGAACCACTTCGTCAGATGGAATCTTTCTCCTCATCACATACCTCT
CTAGGGAACTCAAGCCCCCTTTTTGTATGAAATATGATTCATCCTTGTCTGGACTAAGTA
CCTCATCTTACCTGGGGCCTTGTTGCTACCAGTGTTGCTCTTTATAAAGATAATAAGCTC
TTGGCTGTGGAGTAATGAAAGGAGTGGGTTGGACAGTGGAGGACTGAAATACAGAGATCT
TACTCCACTAGTGGCCTATCCAGCTGTCCAATCACTTTAGTAAGCATGTATATGGCTGCC
AAGAGTAAGATGGTAATGATCGTAGTGTTGACACCCACAGGGTAAATTAGTTCAAAATAA
CCAGGAAGCACTACTTTCATTTTTTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGATATATATTATTGATTGTTCTCAATGAAATAGTTTCCATAAGATTTCGCTCCTTCA
GGATGTCTAAAACATAATTACCTTAAAATTTATCTTCCCATCTTAAATATTTTACACTTG
TCCTTGAGCCAGCTGCATGATCTTTAGAAAGCCTCCTGTTCTGAAGTATGAAGACAGTCT
GCATTGCCGTTCTGTCCTGGGCATGCTGTAAGTTTTTCTGTGAACATCTTTGCCTTCACA
TCTAATGGAAAAGAATTTGCAGTGGCAGCATTTGATGTTTCCCAAGAGAAAGGGTGACTT
TTTGAGGTCATGTTGTACCTTTGGATCTACAAACCTTAGAAGCCATTATCTTAAAATGAT
ATAAATTCGGTTACAAAATGGAAAGATGATTGCATGATTAATGGAGGTTAATAAAGATCA
TTGAAATCCTAGCCTGGATGAGGCCATCAGAAACTATTTAATCCAATTTCCTTTGGCTCC
AGACAGGCCACTTGGGAACCACTTCGTCAGATGGAATCTTTCTCCTCATCACATACCTCT
CTAGGGAACTCAAGCCCCCTTTTTGTATGAAATATGATTCATCCTTGTCTGGACTAAGTA
CCTCATCTTACCTGGGGCCTTGTTGCTACCAGTGTTGCTCTTTATAAAGATAATAAGCTC
TTGGCTGTGGAGTAATGAAAGGAGTGGGTTGGACAGTGGAGGACTGAAATACAGAGATCT
TACTCCACTAGTGGCCTATCCAGCTGTCCAATCACTTTAGTAAGCATGTATATGGCTGCC
AAGAGTAAGATGGTAATGATCGTAGTGTTGACACCCACAGGGTAAATTAGTTCAAAATAA
CCAGGAAGCACTACTTTCATTTTTTTTTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               391-510, - strand, RNAz p=0.516306

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               391-510, - strand, RNAz p=0.516306

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-816, gnl|bosTau2|chr2 (40260541-40261352)
               

               
               1-816, gnl|Hg17|chr2 (134048949-134048145)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-816, gnl|bosTau2|chr2 (40260541-40261352)
               

               
               1-816, gnl|Hg17|chr2 (134048949-134048145)

	1-816, gnl\|bosTau2\|chr2 (40260541-40261352)
	1-816, gnl\|Hg17\|chr2 (134048949-134048145)