Non-Coding RNA Search

Lng1-LNG010008F08

Sequence:


               
               ATGATTAGACAAAAGCAGATTCCAAAGACCCCTCCAAACAGTGATAAAAACTAAGAACAA
TATCTGAAATCTCACGAGATAAAGTTCCTAGCAGTGGGAAGCCAGACCATGTGTCCATGC
AGGTGCCAAGGCTAATTGCTGCACATGTGGCTGGAAAAAGCCAAGAAATGGATGCATCCA
CGACTGCATGTGCCTGGGGCTGTGCCCACAGAACTAGTCTGAGGTTCTGCTCACTGAGAC
CTGCTCAGACCTCTTGGAGATGAAGCATTCAGAGCCTAGGAGACGGCAATGAACAGCATC
TCCAGGCCCTAGGAGGGCAGTCTTGCAAGCAAGGACAGCCCAGGCACCCTGCCATCCAAA
AGAAGCAACACTGGGCAGGAGTAAGAGCCCTGCATCCCGTGCCAGCAGGAAGACTCTGTT
GTGACAGTTTGGGGCAAATCACTCAAATCCCAAGACTCTTCATTTCCTCAATCATAAAAT
GTGGTGGGGAAAAAGAAAAAAATCCTATCCTTCCTATCTCCAGCAATAATACAACTGAAC
ACATTTTGCACACAGCAGAGCCTGCTGCAAATGCCAAGTAGTATTGAGACAGGAATGAGC
TTCAATATCAGGAAAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGATTAGACAAAAGCAGATTCCAAAGACCCCTCCAAACAGTGATAAAAACTAAGAACAA
TATCTGAAATCTCACGAGATAAAGTTCCTAGCAGTGGGAAGCCAGACCATGTGTCCATGC
AGGTGCCAAGGCTAATTGCTGCACATGTGGCTGGAAAAAGCCAAGAAATGGATGCATCCA
CGACTGCATGTGCCTGGGGCTGTGCCCACAGAACTAGTCTGAGGTTCTGCTCACTGAGAC
CTGCTCAGACCTCTTGGAGATGAAGCATTCAGAGCCTAGGAGACGGCAATGAACAGCATC
TCCAGGCCCTAGGAGGGCAGTCTTGCAAGCAAGGACAGCCCAGGCACCCTGCCATCCAAA
AGAAGCAACACTGGGCAGGAGTAAGAGCCCTGCATCCCGTGCCAGCAGGAAGACTCTGTT
GTGACAGTTTGGGGCAAATCACTCAAATCCCAAGACTCTTCATTTCCTCAATCATAAAAT
GTGGTGGGGAAAAAGAAAAAAATCCTATCCTTCCTATCTCCAGCAATAATACAACTGAAC
ACATTTTGCACACAGCAGAGCCTGCTGCAAATGCCAAGTAGTATTGAGACAGGAATGAGC
TTCAATATCAGGAAAGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               191-310, - strand, RNAz p=0.826874

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               191-310, - strand, RNAz p=0.826874

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-617, gnl|bosTau2|chr2 (68844432-68845031)
               

               
               5-617, gnl|Hg17|chr2 (227870407-227871031)
               

               
               5-617, gnl|Mm7|chr1 (82811557-82812151)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-617, gnl|bosTau2|chr2 (68844432-68845031)
               

               
               5-617, gnl|Hg17|chr2 (227870407-227871031)
               

               
               5-617, gnl|Mm7|chr1 (82811557-82812151)

	5-617, gnl\|bosTau2\|chr2 (68844432-68845031)
	5-617, gnl\|Hg17\|chr2 (227870407-227871031)
	5-617, gnl\|Mm7\|chr1 (82811557-82812151)