Lng1-LNG010009E01
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGGTCTCTTTGCCCAGGAGAATCAGAGGCAACTCCAGAGCCAGCCAGAGCATGGCAGAG GATCTGGGGCTGGGCTTTGGGGAGACAGCCAGCGTGGAAATGCTGCCCGAGCACGGCAGC TGCAGACCCAAGGCCAGAAGTAGGCTAGCATCTGGAAGTGGCAGCGCACGCTGGGCTCTG ACCTGCTGCCTGGTGTCGCTCTCCATCCTGGCAGGACTCACCACCTACCTGCTCATTGGC CAGCTCCGGGCCCAAGGAGAAGCCTGTGTGTTTCAGACTCCAAAAGGACAGGAACTTGGA CCTTCACATCAGCGAGTCTATGCGCCTCCTGGAGCTGGCAGAGATAAGCCAAGGGCACAC TTGACAGTTGTGAGACAAACGTCCACAGAGCCCTTGAAAAATCAGTTCCCAGCTCTACAC TGGGAACATGAACTTGGCTTGGCCTTCACCAAGAACCGGATGAACTATACCAATAAATTC CTGGTGATCCCAGAGTCAGGAGACTACTTCATTTACTCCCAGGTCACATTCCGAGGGACT ACATCTGAGTGTGGTGAAATCAGCCAAGAGCGCCGACTAAACAAGCCAGACTCCATCATC GTGGTCATCACCAAGGTAACGGACAGCTACCCGGAGCCAACCCAGCTCCTCATGGGGACC AAGTCAGTGTGTGAAATAGGCAGCAACTGGTTCCAACCCATCTACCTGGGGGCCATGTTC TCCTTGCATGAAGGGGACAAGCTGATGGTGAATGTCAGTGACATCTCTTTGGTGGATTAC A |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGGTCTCTTTGCCCAGGAGAATCAGAGGCAACTCCAGAGCCAGCCAGAGCATGGCAGAG GATCTGGGGCTGGGCTTTGGGGAGACAGCCAGCGTGGAAATGCTGCCCGAGCACGGCAGC TGCAGACCCAAGGCCAGAAGTAGGCTAGCATCTGGAAGTGGCAGCGCACGCTGGGCTCTG ACCTGCTGCCTGGTGTCGCTCTCCATCCTGGCAGGACTCACCACCTACCTGCTCATTGGC CAGCTCCGGGCCCAAGGAGAAGCCTGTGTGTTTCAGACTCCAAAAGGACAGGAACTTGGA CCTTCACATCAGCGAGTCTATGCGCCTCCTGGAGCTGGCAGAGATAAGCCAAGGGCACAC TTGACAGTTGTGAGACAAACGTCCACAGAGCCCTTGAAAAATCAGTTCCCAGCTCTACAC TGGGAACATGAACTTGGCTTGGCCTTCACCAAGAACCGGATGAACTATACCAATAAATTC CTGGTGATCCCAGAGTCAGGAGACTACTTCATTTACTCCCAGGTCACATTCCGAGGGACT ACATCTGAGTGTGGTGAAATCAGCCAAGAGCGCCGACTAAACAAGCCAGACTCCATCATC GTGGTCATCACCAAGGTAACGGACAGCTACCCGGAGCCAACCCAGCTCCTCATGGGGACC AAGTCAGTGTGTGAAATAGGCAGCAACTGGTTCCAACCCATCTACCTGGGGGCCATGTTC TCCTTGCATGAAGGGGACAAGCTGATGGTGAATGTCAGTGACATCTCTTTGGTGGATTAC A |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 4 entry(ies) | More info |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
| 1-198, + strand, RNAz p=0.991867 | |
| 54-165, + strand, RNAz p=0.856036 | |
| 360-558, - strand, RNAz p=0.985196 | |
| 388-544, + strand, RNAz p=0.842756 |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-198, + strand, RNAz p=0.991867 | |
| 54-165, + strand, RNAz p=0.856036 | |
| 360-558, - strand, RNAz p=0.985196 | |
| 388-544, + strand, RNAz p=0.842756 |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 1-268, gnl|bosTau2|chr8 (43912720-43912988) | |
| 1-268, gnl|canFam2|chr11 (71938886-71939267) | |
| 1-268, gnl|echTel1|scaffold_58074 (1717-1349) | |
| 1-268, gnl|hg17|chr9 (114647630-114647999) | |
| 1-268, gnl|Hg17|chr9 (114647895-114647648) | |
| 1-268, gnl|mm7|chr4 (63178498-63178880) | |
| 1-268, gnl|Mm7|chr4 (63178776-63178513) | |
| 1-268, gnl|monDom2|scaffold_38 (4785404-4785773) | |
| 1-268, gnl|oryCun1|scaffold_205411 (72221-71849) | |
| 1-268, gnl|panTro1|chr11 (99183917-99184286) | |
| 1-268, gnl|rheMac2|chr15 (21305026-21304657) | |
| 1-268, gnl|rn3|chr5 (80721043-80721424) | |
| 360-781, gnl|bosTau2|chr8 (43932220-43932641) | |
| 360-781, gnl|canFam2|chr11 (71923042-71923531) | |
| 360-781, gnl|dasNov1|scaffold_5284 (45430-45919) | |
| 360-781, gnl|echTel1|scaffold_295479 (7074-7554) | |
| 360-781, gnl|galGal2|chr17 (8382642-8382179) | |
| 360-781, gnl|hg17|chr9 (114632279-114632768) | |
| 360-781, gnl|Hg17|chr9 (114632748-114632327) | |
| 360-781, gnl|loxAfr1|scaffold_11691 (42165-41676) | |
| 360-781, gnl|mm7|chr4 (63163278-63163765) | |
| 360-781, gnl|Mm7|chr4 (63163747-63163326) | |
| 360-781, gnl|monDom2|scaffold_38 (4754420-4754910) | |
| 360-781, gnl|oryCun1|scaffold_207589 (44786-44301) | |
| 360-781, gnl|panTro1|chr11 (99168564-99169053) | |
| 360-781, gnl|rheMac2|chr15 (21320382-21319893) | |
| 360-781, gnl|rn3|chr5 (80705286-80705776) | |
| 360-781, gnl|xenTro1|scaffold_101 (46994-47456) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-268, gnl|bosTau2|chr8 (43912720-43912988) | |
| 1-268, gnl|canFam2|chr11 (71938886-71939267) | |
| 1-268, gnl|echTel1|scaffold_58074 (1717-1349) | |
| 1-268, gnl|hg17|chr9 (114647630-114647999) | |
| 1-268, gnl|Hg17|chr9 (114647895-114647648) | |
| 1-268, gnl|mm7|chr4 (63178498-63178880) | |
| 1-268, gnl|Mm7|chr4 (63178776-63178513) | |
| 1-268, gnl|monDom2|scaffold_38 (4785404-4785773) | |
| 1-268, gnl|oryCun1|scaffold_205411 (72221-71849) | |
| 1-268, gnl|panTro1|chr11 (99183917-99184286) | |
| 1-268, gnl|rheMac2|chr15 (21305026-21304657) | |
| 1-268, gnl|rn3|chr5 (80721043-80721424) | |
| 360-781, gnl|bosTau2|chr8 (43932220-43932641) | |
| 360-781, gnl|canFam2|chr11 (71923042-71923531) | |
| 360-781, gnl|dasNov1|scaffold_5284 (45430-45919) | |
| 360-781, gnl|echTel1|scaffold_295479 (7074-7554) | |
| 360-781, gnl|galGal2|chr17 (8382642-8382179) | |
| 360-781, gnl|hg17|chr9 (114632279-114632768) | |
| 360-781, gnl|Hg17|chr9 (114632748-114632327) | |
| 360-781, gnl|loxAfr1|scaffold_11691 (42165-41676) | |
| 360-781, gnl|mm7|chr4 (63163278-63163765) | |
| 360-781, gnl|Mm7|chr4 (63163747-63163326) | |
| 360-781, gnl|monDom2|scaffold_38 (4754420-4754910) | |
| 360-781, gnl|oryCun1|scaffold_207589 (44786-44301) | |
| 360-781, gnl|panTro1|chr11 (99168564-99169053) | |
| 360-781, gnl|rheMac2|chr15 (21320382-21319893) | |
| 360-781, gnl|rn3|chr5 (80705286-80705776) | |
| 360-781, gnl|xenTro1|scaffold_101 (46994-47456) |