Non-Coding RNA Search

Lng1-LNG010010A06

Sequence:


               
               CTTTCTCTTTCTGGcttaacttagcatgataatctctaagtctatccatgttgctacaaa
tggcatgatttcattcttttttctggctgaataatattccattgtgtacgtataccacat
tttctttatcctttcatctgtccatggacatttaagttgtttccatgtcttggctattat
aaatagtgctgctatgaacataaaggggcatatatctttggaattctagttttatcctga
tttatgcccaggagtgggattgcTAGATCACATAGCTGCCAAGTCTTGGTTATTATCCTG
GACTTGGGAATTCAAGGGGTGGATTCATCAATGAATAGATAAAGGAGAGAGAAGAAAATT
CCTAATACATAGAGGGTATATCAGCTTTCTGGATGGAAATTGAGGGGAAAACTTAATGTA
ATTGGCACAAGTCATAAGGCCAAGAAATTCAACTCAAATGAAAAGTTCAGTCCCTTGAAC
ACGGATTCTAGGACACCTGTTGTTCATTAGCTGGAGGAGAAGCACAATTGCAGCCAGTAA
AACATCTTCAGGAATGTATGTCAGATAGAAAATGTTAGGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTCTCTTTCTGGcttaacttagcatgataatctctaagtctatccatgttgctacaaa
tggcatgatttcattcttttttctggctgaataatattccattgtgtacgtataccacat
tttctttatcctttcatctgtccatggacatttaagttgtttccatgtcttggctattat
aaatagtgctgctatgaacataaaggggcatatatctttggaattctagttttatcctga
tttatgcccaggagtgggattgcTAGATCACATAGCTGCCAAGTCTTGGTTATTATCCTG
GACTTGGGAATTCAAGGGGTGGATTCATCAATGAATAGATAAAGGAGAGAGAAGAAAATT
CCTAATACATAGAGGGTATATCAGCTTTCTGGATGGAAATTGAGGGGAAAACTTAATGTA
ATTGGCACAAGTCATAAGGCCAAGAAATTCAACTCAAATGAAAAGTTCAGTCCCTTGAAC
ACGGATTCTAGGACACCTGTTGTTCATTAGCTGGAGGAGAAGCACAATTGCAGCCAGTAA
AACATCTTCAGGAATGTATGTCAGATAGAAAATGTTAGGAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|26330456|dbj|BAC28958.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|26330456|dbj|BAC28958.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               40-156, - strand, RNAz p=0.955471

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-156, - strand, RNAz p=0.955471

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-273, gnl|bosTau2|chr10 (48462517-48462792)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-273, gnl|bosTau2|chr10 (48462517-48462792)