Non-Coding RNA Search

Lng1-LNG010013A01

Sequence:


               
               ATTTGGATTGTTCCAGCTAGTGATAGACTTGTCTTAGAAGGTCTCTCTTACCTATTTTGA
TAGTTGTAGTATATTATAAAAATCACAATTTCTTCCCCTCTTTGCATCCAAGTCTTTTTA
ATGTGATGTTTAAGATCCTCCCATAAAGAGTTGAAGTATATTTCTCTACCTCTTCAACCT
GGGTAGACCATGTGACGTGCTTTAGGTGAAGGGACATAAGCAAATATGACAATTAGCAGA
GACCTGATAAGTGCTCATATGTTGGAGCCTGACCTCTTGCTGAACTTGAGCCCTGAGCCA
TCGTGTTTTATGAGCCTGAGCTATCCTCTGGACGGAAGAGAGAGCACATGGAAGAGAACC
AAGGTATCCTGACTGGCAGGCTGCCAAATGCCAGAAATGTGAGGGAAGCCATCTATAGGA
AGCAAAATAAGCCCCCTCTTGAcaaagatatccacattctaatcctcaggatctatgact
atgttatcttacaaggcaaaagagactctgaagatgtgattaaattaaggattttgaagt
gaagacattatcctgaattatctgggtgggctcattgtaatcatgagagtccttatagga
tggagacaggaaggtcagagttagagaGGTGACCCTAGAATGGAGGTGAGAAAGGAAGTC
AGAGAGAGCCTGAAGATGCTTTCCTGCTGGCCATGCAACANAGAATGCAAGTCGCCTCTA
GAATCTGGAAAAAGCAAGGAAACAGATTCTCCTCTAAATCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTGGATTGTTCCAGCTAGTGATAGACTTGTCTTAGAAGGTCTCTCTTACCTATTTTGA
TAGTTGTAGTATATTATAAAAATCACAATTTCTTCCCCTCTTTGCATCCAAGTCTTTTTA
ATGTGATGTTTAAGATCCTCCCATAAAGAGTTGAAGTATATTTCTCTACCTCTTCAACCT
GGGTAGACCATGTGACGTGCTTTAGGTGAAGGGACATAAGCAAATATGACAATTAGCAGA
GACCTGATAAGTGCTCATATGTTGGAGCCTGACCTCTTGCTGAACTTGAGCCCTGAGCCA
TCGTGTTTTATGAGCCTGAGCTATCCTCTGGACGGAAGAGAGAGCACATGGAAGAGAACC
AAGGTATCCTGACTGGCAGGCTGCCAAATGCCAGAAATGTGAGGGAAGCCATCTATAGGA
AGCAAAATAAGCCCCCTCTTGAcaaagatatccacattctaatcctcaggatctatgact
atgttatcttacaaggcaaaagagactctgaagatgtgattaaattaaggattttgaagt
gaagacattatcctgaattatctgggtgggctcattgtaatcatgagagtccttatagga
tggagacaggaaggtcagagttagagaGGTGACCCTAGAATGGAGGTGAGAAAGGAAGTC
AGAGAGAGCCTGAAGATGCTTTCCTGCTGGCCATGCAACANAGAATGCAAGTCGCCTCTA
GAATCTGGAAAAAGCAAGGAAACAGATTCTCCTCTAAATCCTC

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

Help | Less info


               
               353-470, - strand, RNAz p=0.939454
               

               
               589-698, + strand, RNAz p=0.597088

Predicted RNA structure(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               353-470, - strand, RNAz p=0.939454
               

               
               589-698, + strand, RNAz p=0.597088

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-763, gnl|bosTau2|chr14 (34713147-34712412)
               

               
               1-763, gnl|Hg17|chr8 (109729418-109730171)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-763, gnl|bosTau2|chr14 (34713147-34712412)
               

               
               1-763, gnl|Hg17|chr8 (109729418-109730171)

	353-470, - strand, RNAz p=0.939454
	589-698, + strand, RNAz p=0.597088

	1-763, gnl\|bosTau2\|chr14 (34713147-34712412)
	1-763, gnl\|Hg17\|chr8 (109729418-109730171)