Lng1-LNG010016E03
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTACAGTTTATTCTGAGTGTCAGACTCGATTATAGGATCTCATACATGCTGTCAATATAT AAGAAGGAATTCGGGGAGAATAATGGAAATGCTGAAACATCCACCAACGGCTCTCCTGAT ACATTGCTGCCATCAGCTATTGTTCCTGATATAGATGAAATTGCAGCGCAGGCAGAAACT ATGTTTGCTGGAAGAAAAGAAAAAAATCCAGTTCAACTTGACGATGAAGGAGGCAGGACG TTTTTACGGGTCCTCATTCATCTGATCATGCATGACTACCCTCCTTTGCTGTCAGGAGCC CTGCAGCTGCTGTTCAAGCACTTCAGCCAGAGAGCGGAAGTTTTACAGGCCTTTAAACAG GTGCAGTTGCTGGTGTCCAATCAGGATGTGGATAACTACAAGCAAATCAAGGCAGACCTA GACCAGCTTCGACTAACTGTAGAAAAATCCGAGTTATGGGTTGAGAAGAACAGCAGCTAT GAAAATGGAGAAATGGGTGAAAGTCAAGTAAAAGGTGGTGAAGAGCCAATTGAGGACTCA AACATTTTAAGTCCAGTACAAGATGGAACAAAGAAGCCCCAGATTGACAGCAATAAGAGC AACAACTACCGGATTGTAAAGGAGATTTTGATTAGGTTAAGTAAACTCTGTGTACAGAAT AAAAAGTGTCGGAATCAACATCAACGATTACTGAAAAATATGGGAGCTCATTCAGTGGTG TTGGACCTTTTGCAGATCCCCTATGAAAAGAACGATGAAAAGATGAATGAAGTCATGAAT CTAGCCCATACATTCCTGCAGAACTTCTGCAGAGGAAAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTACAGTTTATTCTGAGTGTCAGACTCGATTATAGGATCTCATACATGCTGTCAATATAT AAGAAGGAATTCGGGGAGAATAATGGAAATGCTGAAACATCCACCAACGGCTCTCCTGAT ACATTGCTGCCATCAGCTATTGTTCCTGATATAGATGAAATTGCAGCGCAGGCAGAAACT ATGTTTGCTGGAAGAAAAGAAAAAAATCCAGTTCAACTTGACGATGAAGGAGGCAGGACG TTTTTACGGGTCCTCATTCATCTGATCATGCATGACTACCCTCCTTTGCTGTCAGGAGCC CTGCAGCTGCTGTTCAAGCACTTCAGCCAGAGAGCGGAAGTTTTACAGGCCTTTAAACAG GTGCAGTTGCTGGTGTCCAATCAGGATGTGGATAACTACAAGCAAATCAAGGCAGACCTA GACCAGCTTCGACTAACTGTAGAAAAATCCGAGTTATGGGTTGAGAAGAACAGCAGCTAT GAAAATGGAGAAATGGGTGAAAGTCAAGTAAAAGGTGGTGAAGAGCCAATTGAGGACTCA AACATTTTAAGTCCAGTACAAGATGGAACAAAGAAGCCCCAGATTGACAGCAATAAGAGC AACAACTACCGGATTGTAAAGGAGATTTTGATTAGGTTAAGTAAACTCTGTGTACAGAAT AAAAAGTGTCGGAATCAACATCAACGATTACTGAAAAATATGGGAGCTCATTCAGTGGTG TTGGACCTTTTGCAGATCCCCTATGAAAAGAACGATGAAAAGATGAATGAAGTCATGAAT CTAGCCCATACATTCCTGCAGAACTTCTGCAGAGGAAAT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 233-352, - strand, RNAz p=0.644744 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 233-352, - strand, RNAz p=0.644744 |
| Aligned organism(s): 43 entry(ies) | More info |
| Aligned organism(s): 43 entry(ies) | Help | Less info |
| 1-141, gnl|bosTau2|chr5 (50934040-50933900) | |
| 1-141, gnl|Hg17|chr12 (26672368-26672228) | |
| 1-141, gnl|Mm7|chr6 (146433084-146432945) | |
| 193-363, gnl|bosTau2|chr5 (50929886-50929716) | |
| 193-363, gnl|canFam2|chr27 (24003528-24003335) | |
| 193-363, gnl|danRer3|chr18 (16523146-16523332) | |
| 193-363, gnl|echTel1|scaffold_300615 (39140-39333) | |
| 193-363, gnl|fr1|chrUn (113370002-113370184) | |
| 193-363, gnl|galGal2|chr1 (64405029-64405205) | |
| 193-363, gnl|hg17|chr12 (26666430-26666623) | |
| 193-363, gnl|Hg17|chr12 (26666607-26666437) | |
| 193-363, gnl|loxAfr1|scaffold_19754 (11992-12185) | |
| 193-363, gnl|mm7|chr6 (146425377-146425570) | |
| 193-363, gnl|Mm7|chr6 (146425554-146425384) | |
| 193-363, gnl|monDom2|scaffold_30 (1309398-1309591) | |
| 193-363, gnl|oryCun1|scaffold_198214 (37270-37463) | |
| 193-363, gnl|panTro1|chrUn_random (53073579-53073772) | |
| 193-363, gnl|rheMac2|chr11 (26918261-26918454) | |
| 193-363, gnl|rn3|chr4 (184158230-184158423) | |
| 193-363, gnl|tetNig1|chr13 (4743302-4743126) | |
| 193-363, gnl|xenTro1|scaffold_173 (1769129-1768936) | |
| 217-362, gnl|bosTau2|chr22 (16891110-16891255) | |
| 217-362, gnl|Hg17|chr3 (4700092-4700237) | |
| 217-362, gnl|Mm7|chr6 (108487965-108488110) | |
| 623-750, gnl|bosTau2|chr5 (50902989-50902862) | |
| 623-750, gnl|canFam2|chr27 (24024870-24024720) | |
| 623-750, gnl|danRer3|chr18 (16519676-16519826) | |
| 623-750, gnl|dasNov1|scaffold_172651 (1251-1102) | |
| 623-750, gnl|echTel1|scaffold_306282 (6919-6766) | |
| 623-750, gnl|fr1|chrUn (113369013-113369148) | |
| 623-750, gnl|galGal2|chr1 (64398137-64398268) | |
| 623-750, gnl|hg17|chr12 (26646569-26646722) | |
| 623-750, gnl|Hg17|chr12 (26646697-26646570) | |
| 623-750, gnl|loxAfr1|scaffold_22796 (41893-42043) | |
| 623-750, gnl|mm7|chr6 (146407791-146407944) | |
| 623-750, gnl|Mm7|chr6 (146407919-146407792) | |
| 623-750, gnl|monDom2|scaffold_30 (1286530-1286676) | |
| 623-750, gnl|oryCun1|scaffold_190809 (8375-8225) | |
| 623-750, gnl|panTro1|chrUn_random (53053640-53053793) | |
| 623-750, gnl|rheMac2|chr11 (26899959-26900112) | |
| 623-750, gnl|rn3|chr4 (184139977-184140130) | |
| 623-750, gnl|tetNig1|chr13 (4744094-4743965) | |
| 623-750, gnl|xenTro1|scaffold_1291 (62169-62014) |
| Aligned organism(s): 43 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-141, gnl|bosTau2|chr5 (50934040-50933900) | |
| 1-141, gnl|Hg17|chr12 (26672368-26672228) | |
| 1-141, gnl|Mm7|chr6 (146433084-146432945) | |
| 193-363, gnl|bosTau2|chr5 (50929886-50929716) | |
| 193-363, gnl|canFam2|chr27 (24003528-24003335) | |
| 193-363, gnl|danRer3|chr18 (16523146-16523332) | |
| 193-363, gnl|echTel1|scaffold_300615 (39140-39333) | |
| 193-363, gnl|fr1|chrUn (113370002-113370184) | |
| 193-363, gnl|galGal2|chr1 (64405029-64405205) | |
| 193-363, gnl|hg17|chr12 (26666430-26666623) | |
| 193-363, gnl|Hg17|chr12 (26666607-26666437) | |
| 193-363, gnl|loxAfr1|scaffold_19754 (11992-12185) | |
| 193-363, gnl|mm7|chr6 (146425377-146425570) | |
| 193-363, gnl|Mm7|chr6 (146425554-146425384) | |
| 193-363, gnl|monDom2|scaffold_30 (1309398-1309591) | |
| 193-363, gnl|oryCun1|scaffold_198214 (37270-37463) | |
| 193-363, gnl|panTro1|chrUn_random (53073579-53073772) | |
| 193-363, gnl|rheMac2|chr11 (26918261-26918454) | |
| 193-363, gnl|rn3|chr4 (184158230-184158423) | |
| 193-363, gnl|tetNig1|chr13 (4743302-4743126) | |
| 193-363, gnl|xenTro1|scaffold_173 (1769129-1768936) | |
| 217-362, gnl|bosTau2|chr22 (16891110-16891255) | |
| 217-362, gnl|Hg17|chr3 (4700092-4700237) | |
| 217-362, gnl|Mm7|chr6 (108487965-108488110) | |
| 623-750, gnl|bosTau2|chr5 (50902989-50902862) | |
| 623-750, gnl|canFam2|chr27 (24024870-24024720) | |
| 623-750, gnl|danRer3|chr18 (16519676-16519826) | |
| 623-750, gnl|dasNov1|scaffold_172651 (1251-1102) | |
| 623-750, gnl|echTel1|scaffold_306282 (6919-6766) | |
| 623-750, gnl|fr1|chrUn (113369013-113369148) | |
| 623-750, gnl|galGal2|chr1 (64398137-64398268) | |
| 623-750, gnl|hg17|chr12 (26646569-26646722) | |
| 623-750, gnl|Hg17|chr12 (26646697-26646570) | |
| 623-750, gnl|loxAfr1|scaffold_22796 (41893-42043) | |
| 623-750, gnl|mm7|chr6 (146407791-146407944) | |
| 623-750, gnl|Mm7|chr6 (146407919-146407792) | |
| 623-750, gnl|monDom2|scaffold_30 (1286530-1286676) | |
| 623-750, gnl|oryCun1|scaffold_190809 (8375-8225) | |
| 623-750, gnl|panTro1|chrUn_random (53053640-53053793) | |
| 623-750, gnl|rheMac2|chr11 (26899959-26900112) | |
| 623-750, gnl|rn3|chr4 (184139977-184140130) | |
| 623-750, gnl|tetNig1|chr13 (4744094-4743965) | |
| 623-750, gnl|xenTro1|scaffold_1291 (62169-62014) |