Non-Coding RNA Search

Lng1-LNG010016F09

Sequence:


               
               TTTTTTTTTTATGTCTgcacccatggcatgtggaagttcccaggccagggattgaatctg
agcagcagctgtgacctgtgtcacagccgcagcatcggcacatccttccatccactgagc
tgggccagcaatggaaccccagcctctgcagccgtctgggccactgcagtcatctccttg
acccactgcaccacagcaggagctccCCTTGCCCTTTGTAGATAAAGGAATTGAGGCCAG
AGTTCTAGAGATACCTGGGACTGACACCCACTTTTTGTCTGTTCTTTCTACCATGTTAGA
CCCCCTGAAGGAGGAAACATCAGAAAAATATTGTATGAAAGCAGAGGAAGACTAAAAGGA
ACAGAAAGAAAGCTAAGGTGTCCCCCGCAGCTGGTTTTTGGATAAATCACAGAACATTGT
TTAACACAGCGGGCAGCCAGCGTAATGGAGCTTGTTGCCCAGAGCAGAGAGGTGGGGTAG
AAAGGTTTGGGAAGGTTTTGTGGGAGGTGACAGGTAGTCCAGCGCTCTTGCACCAGTTAG
AGAAGTTGAGGAATGTTTTGAGAATACATTACTGAGTTTGAAATTGAGAGAGCAGCTGGT
TTTTCATTCAGTAATTTTACCGAGCATCTGCTGTGCCTTGCCGTCCAATTCCAGCCTGAG
GAGCTCACACTGGCTGAATGTTCTTACTGATGGTTATCCTGCAAGTGCCTTTGAGACATG
TGCTGGGGTAACCTCCAGAGACATCCAGCCAGCAGAGTACACACCCTAAACAAAAGATCC
TTTCAGGGTTAAATTGGCAAGGAAGTACAGATAGGTAAGCAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTATGTCTgcacccatggcatgtggaagttcccaggccagggattgaatctg
agcagcagctgtgacctgtgtcacagccgcagcatcggcacatccttccatccactgagc
tgggccagcaatggaaccccagcctctgcagccgtctgggccactgcagtcatctccttg
acccactgcaccacagcaggagctccCCTTGCCCTTTGTAGATAAAGGAATTGAGGCCAG
AGTTCTAGAGATACCTGGGACTGACACCCACTTTTTGTCTGTTCTTTCTACCATGTTAGA
CCCCCTGAAGGAGGAAACATCAGAAAAATATTGTATGAAAGCAGAGGAAGACTAAAAGGA
ACAGAAAGAAAGCTAAGGTGTCCCCCGCAGCTGGTTTTTGGATAAATCACAGAACATTGT
TTAACACAGCGGGCAGCCAGCGTAATGGAGCTTGTTGCCCAGAGCAGAGAGGTGGGGTAG
AAAGGTTTGGGAAGGTTTTGTGGGAGGTGACAGGTAGTCCAGCGCTCTTGCACCAGTTAG
AGAAGTTGAGGAATGTTTTGAGAATACATTACTGAGTTTGAAATTGAGAGAGCAGCTGGT
TTTTCATTCAGTAATTTTACCGAGCATCTGCTGTGCCTTGCCGTCCAATTCCAGCCTGAG
GAGCTCACACTGGCTGAATGTTCTTACTGATGGTTATCCTGCAAGTGCCTTTGAGACATG
TGCTGGGGTAACCTCCAGAGACATCCAGCCAGCAGAGTACACACCCTAAACAAAAGATCC
TTTCAGGGTTAAATTGGCAAGGAAGTACAGATAGGTAAGCAGA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               613-731, - strand, RNAz p=0.859761

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               613-731, - strand, RNAz p=0.859761

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               209-820, gnl|bosTau2|chr19 (19358528-19357916)
               

               
               209-820, gnl|Hg17|chr17 (4112881-4111577)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               209-820, gnl|bosTau2|chr19 (19358528-19357916)
               

               
               209-820, gnl|Hg17|chr17 (4112881-4111577)

	209-820, gnl\|bosTau2\|chr19 (19358528-19357916)
	209-820, gnl\|Hg17\|chr17 (4112881-4111577)