Non-Coding RNA Search

Lng1-LNG010017E01

Sequence:


               
               TCTGCGTTCTATTCTTAACTTTGTCACCAAATATGCTACCTTAGGTGAGACAAGTGGTTC
TGTGTCACAGTTGTAACTCAGTTTCAATGTATCAAGGATGAATTATACTTGCATCTCCTG
GTGGAGTTGTGGGCACAACTGAGATTAAAAAACAAAAAATAAGACAAGATGAGATAATAG
AATGCGAACCCAGAGAAATAGAAAGTATGATGGACTGCCCTGTGTATAGGAAAAAAATAG
ATTTAGTCATGGAAAGTAAGTAAAATACCATGGAAAGATATGCGAAATGTCAGAAGCCAC
AAATAGCTTGCTGGAAGGAGGACCACAAAGGGAGCAGAAGTGAACGGGCTGAGGGGTGAC
TGAATCCGTTAATCCATGTCAATCCACGTGTGGCTGCCTGGTTCCTCCTTCCCACAGCGC
CCCCTCTGCATCAGCCCTGGATCACCCCTCTAAACCGCCTGTGGGAATTTTTCTATCTGG
GCTACTGTCTTCTCTCTAGTCCCAGTTTACCCTTTCCTGACTCCCCTTCTCTAGTGATGT
CACTTCTGTAAGGCAGAAGTGAGCTGTTTGCAGTCTGGAATCCTCAGTCTGAGGACCCTG
TGCCTTCCCTGCCCCCCAGCTGGGTGCTCTCTGCGTGCCAGCCTAACTCGTTATCCTGGC
AAGGACATCGATCTCAGGCTGTGCTAGTTTGCAGAGGAGATCATGGAGAATCTCTAAAGC
AGTGTGACACTCCACCTGGCCAGCCCTGCCCTTCCAATACTGAGGCCCCTTGCATCCCCT
GCCGATTGGAATTCTCAGAAGATTGTGAGACATGGATCATTGTGAATTCCAGCTTCCTCA
T

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTGCGTTCTATTCTTAACTTTGTCACCAAATATGCTACCTTAGGTGAGACAAGTGGTTC
TGTGTCACAGTTGTAACTCAGTTTCAATGTATCAAGGATGAATTATACTTGCATCTCCTG
GTGGAGTTGTGGGCACAACTGAGATTAAAAAACAAAAAATAAGACAAGATGAGATAATAG
AATGCGAACCCAGAGAAATAGAAAGTATGATGGACTGCCCTGTGTATAGGAAAAAAATAG
ATTTAGTCATGGAAAGTAAGTAAAATACCATGGAAAGATATGCGAAATGTCAGAAGCCAC
AAATAGCTTGCTGGAAGGAGGACCACAAAGGGAGCAGAAGTGAACGGGCTGAGGGGTGAC
TGAATCCGTTAATCCATGTCAATCCACGTGTGGCTGCCTGGTTCCTCCTTCCCACAGCGC
CCCCTCTGCATCAGCCCTGGATCACCCCTCTAAACCGCCTGTGGGAATTTTTCTATCTGG
GCTACTGTCTTCTCTCTAGTCCCAGTTTACCCTTTCCTGACTCCCCTTCTCTAGTGATGT
CACTTCTGTAAGGCAGAAGTGAGCTGTTTGCAGTCTGGAATCCTCAGTCTGAGGACCCTG
TGCCTTCCCTGCCCCCCAGCTGGGTGCTCTCTGCGTGCCAGCCTAACTCGTTATCCTGGC
AAGGACATCGATCTCAGGCTGTGCTAGTTTGCAGAGGAGATCATGGAGAATCTCTAAAGC
AGTGTGACACTCCACCTGGCCAGCCCTGCCCTTCCAATACTGAGGCCCCTTGCATCCCCT
GCCGATTGGAATTCTCAGAAGATTGTGAGACATGGATCATTGTGAATTCCAGCTTCCTCA
T

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

Help | Less info


               
               226-322, - strand, RNAz p=0.594144
               

               
               612-712, - strand, RNAz p=0.532767

Predicted RNA structure(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               226-322, - strand, RNAz p=0.594144
               

               
               612-712, - strand, RNAz p=0.532767

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-841, gnl|bosTau2|chr24 (22246246-22245419)
               

               
               1-841, gnl|Hg17|chr18 (22908043-22907091)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-841, gnl|bosTau2|chr24 (22246246-22245419)
               

               
               1-841, gnl|Hg17|chr18 (22908043-22907091)

	226-322, - strand, RNAz p=0.594144
	612-712, - strand, RNAz p=0.532767

	1-841, gnl\|bosTau2\|chr24 (22246246-22245419)
	1-841, gnl\|Hg17\|chr18 (22908043-22907091)