Non-Coding RNA Search

Lng1-LNG010019D03

Sequence:


               
               TCAACTGAAAAGCCACTTTGAGAAAATAGCTTTTATTGTAAGTCTGACATTTTGATGAGA
AGAAAGAGTAGTAATAGAGAAAGAAATAAGGGGAGAAAACCCTTTCTTTTAGGCAAACAC
TACCTCTGTGTCTAGTATATATTTGAAACCTCTGATAACTGTTTGCATACTTATTTAACA
AAAGATAGGCTTTAGGGATTGATGTTGTATTTCATGTAGAAGCCTAAAGGAAATATCAGT
GAGACCTTCTCTTTAGAGAGTAGCGGGGGTAGGAGTAAACCTCCTGAACCACTGCTCATC
TGTCACCATTAGGCCTTCAGTTAGATACTGCAGAGTATTTTTGACAGACAAAAGAGCCCG
GCATGACTATTGGAGCTCCTATTTGACTTTCATAATAAAGGAATTTATTACCTTCCCCTT
CTTCTGCTTAGATTAGCTTTAGAATATTGAAGATCTCGGTGTGTCCCAAAATTAAGAATG
TTTTTTGGGGAAGGGTTTTCAGAAAGAACTAAGACATATGCACACATGTACACAAACACA
ATGTTAAGACAAGTTGTTAGTCCTTTAATTGTTGCTCCTCTCATTTCCCAGCATTTGCTT
TACCCCAACATGCAAAATGCTCATCATTAAATTTAGATATCAGCACACTAAGTATAAAAT
ATCCTGATGAATATAAGAGGAAATCAGAGAGGAAAGTTTTTTGCATTCAAGGATCCCAGA
ATATTCTAAGTATTTAGTACGCGGAAGTCCCTAGTCTGTAGTAGCCTATCAACCTTAGCA
CTTGTAGATTTTTAATAAATGCTTTCCCCTTTTATTTTTTATGTAGACAAATTGCAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAACTGAAAAGCCACTTTGAGAAAATAGCTTTTATTGTAAGTCTGACATTTTGATGAGA
AGAAAGAGTAGTAATAGAGAAAGAAATAAGGGGAGAAAACCCTTTCTTTTAGGCAAACAC
TACCTCTGTGTCTAGTATATATTTGAAACCTCTGATAACTGTTTGCATACTTATTTAACA
AAAGATAGGCTTTAGGGATTGATGTTGTATTTCATGTAGAAGCCTAAAGGAAATATCAGT
GAGACCTTCTCTTTAGAGAGTAGCGGGGGTAGGAGTAAACCTCCTGAACCACTGCTCATC
TGTCACCATTAGGCCTTCAGTTAGATACTGCAGAGTATTTTTGACAGACAAAAGAGCCCG
GCATGACTATTGGAGCTCCTATTTGACTTTCATAATAAAGGAATTTATTACCTTCCCCTT
CTTCTGCTTAGATTAGCTTTAGAATATTGAAGATCTCGGTGTGTCCCAAAATTAAGAATG
TTTTTTGGGGAAGGGTTTTCAGAAAGAACTAAGACATATGCACACATGTACACAAACACA
ATGTTAAGACAAGTTGTTAGTCCTTTAATTGTTGCTCCTCTCATTTCCCAGCATTTGCTT
TACCCCAACATGCAAAATGCTCATCATTAAATTTAGATATCAGCACACTAAGTATAAAAT
ATCCTGATGAATATAAGAGGAAATCAGAGAGGAAAGTTTTTTGCATTCAAGGATCCCAGA
ATATTCTAAGTATTTAGTACGCGGAAGTCCCTAGTCTGTAGTAGCCTATCAACCTTAGCA
CTTGTAGATTTTTAATAAATGCTTTCCCCTTTTATTTTTTATGTAGACAAATTGCAAAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               316-551, - strand, RNAz p=0.664156

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               316-551, - strand, RNAz p=0.664156

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-813, gnl|bosTau2|chr28 (23769609-23770415)
               

               
               1-813, gnl|Mm7|chr10 (59030702-59030005)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-813, gnl|bosTau2|chr28 (23769609-23770415)
               

               
               1-813, gnl|Mm7|chr10 (59030702-59030005)

	1-813, gnl\|bosTau2\|chr28 (23769609-23770415)
	1-813, gnl\|Mm7\|chr10 (59030702-59030005)