Lng1-LNG010019D05
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTATCTACTTTAGCATCTGGAAAGGTGTCAAAACATCTGGCAAGGTGGTTTGGGTGACA GCCACTTTCCCCTACATCATCCTTTCGATTCTGCTGGTAAGGGGGGCCACGCTCCCCGGG GCCTGGAGGGGAGTTCTCTTCTACTTGAAACCCAACTGGCAGAAACTCCTGGAGACAGGG GTGTGGGTGGATGCGGCTGCTCAGATCTTCTTCTCTCTTGGGCCTGGCTTTGGAGTCCTG CTGGCTTTTGCTAGCTACAACAAATTCAACAACAACTGTTACCAAGACGCCTTGGTGACC AGTGTGGTGAACTGCATGACGAGCTTCGTTTCAGGATTTGTCATCTTCACCGTGCTCGGG TATATGGCTGAGATGAGGAACGAAGATGTGTCTGAGGTGGCCAAAGATGCAGGCCCCAGC CTCCTCTTCATCACCTACGCAGAGGCCATCGCCAACATGCCCGCGTCCACCTTCTTTGCC ATCATCTTCTTCCTGATGTTGATCACCCTGGGCTTAGACAGCACATTCGCAGGCTTGGAG GGGGTGATCACCGCTGTGCTGGATGAGTTTCCACACTTCTGGTCCAAGCGCCGGGAGTGG CTTGCGCTCGGCGTGGTCATCACCTGCTTCTTGGGATCTCTGATCACCCTGACTTTCGGA GGGGCCTATGTGGTGAAGCTGCTGGAGGAGTTTGCCACGGGACCTGCAGTGCTCACCGTT GCCCTGATAGAGGCAGTTGCTGTGTTTTGGTTCTACGGCATCACTCAGTTCTGCAGTGAT GTGAAGGAAATGCTTGGCTTCAGCCCTGGATGGTTTTGGAGGATCTGCTGGGTAGCTATC AGCCCTCTGTTTCTCGTGTTCATCATCTGCAGTTTTTTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTATCTACTTTAGCATCTGGAAAGGTGTCAAAACATCTGGCAAGGTGGTTTGGGTGACA GCCACTTTCCCCTACATCATCCTTTCGATTCTGCTGGTAAGGGGGGCCACGCTCCCCGGG GCCTGGAGGGGAGTTCTCTTCTACTTGAAACCCAACTGGCAGAAACTCCTGGAGACAGGG GTGTGGGTGGATGCGGCTGCTCAGATCTTCTTCTCTCTTGGGCCTGGCTTTGGAGTCCTG CTGGCTTTTGCTAGCTACAACAAATTCAACAACAACTGTTACCAAGACGCCTTGGTGACC AGTGTGGTGAACTGCATGACGAGCTTCGTTTCAGGATTTGTCATCTTCACCGTGCTCGGG TATATGGCTGAGATGAGGAACGAAGATGTGTCTGAGGTGGCCAAAGATGCAGGCCCCAGC CTCCTCTTCATCACCTACGCAGAGGCCATCGCCAACATGCCCGCGTCCACCTTCTTTGCC ATCATCTTCTTCCTGATGTTGATCACCCTGGGCTTAGACAGCACATTCGCAGGCTTGGAG GGGGTGATCACCGCTGTGCTGGATGAGTTTCCACACTTCTGGTCCAAGCGCCGGGAGTGG CTTGCGCTCGGCGTGGTCATCACCTGCTTCTTGGGATCTCTGATCACCCTGACTTTCGGA GGGGCCTATGTGGTGAAGCTGCTGGAGGAGTTTGCCACGGGACCTGCAGTGCTCACCGTT GCCCTGATAGAGGCAGTTGCTGTGTTTTGGTTCTACGGCATCACTCAGTTCTGCAGTGAT GTGAAGGAAATGCTTGGCTTCAGCCCTGGATGGTTTTGGAGGATCTGCTGGGTAGCTATC AGCCCTCTGTTTCTCGTGTTCATCATCTGCAGTTTTTTG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 44-182, + strand, RNAz p=0.92933 | |
| 526-644, + strand, RNAz p=0.575948 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 44-182, + strand, RNAz p=0.92933 | |
| 526-644, + strand, RNAz p=0.575948 |
| Aligned organism(s): 59 entry(ies) | More info |
| Aligned organism(s): 59 entry(ies) | Help | Less info |
| 44-182, gnl|bosTau2|chr19 (15741077-15740939) | |
| 44-182, gnl|Hg17|chr17 (25567362-25567224) | |
| 44-182, gnl|Mm7|chr11 (77098202-77098340) | |
| 276-413, gnl|bosTau2|chr19 (15739439-15739302) | |
| 276-413, gnl|canFam2|chr9 (47564793-47564962) | |
| 276-413, gnl|danRer3|chr15 (34859777-34859948) | |
| 276-413, gnl|dasNov1|scaffold_190043 (4124-4268) | |
| 276-413, gnl|echTel1|scaffold_293984 (9233-9066) | |
| 276-413, gnl|fr1|chrUn (168565784-168565619) | |
| 276-413, gnl|galGal2|chr19 (5787490-5787647) | |
| 276-413, gnl|hg17|chr17 (25563866-25564035) | |
| 276-413, gnl|Hg17|chr17 (25564020-25563883) | |
| 276-413, gnl|loxAfr1|scaffold_26416 (6533-6698) | |
| 276-413, gnl|mm7|chr11 (77099962-77099805) | |
| 276-413, gnl|Mm7|chr11 (77099806-77099943) | |
| 276-413, gnl|monDom2|scaffold_86 (615117-615285) | |
| 276-413, gnl|oryCun1|scaffold_204035 (12908-13075) | |
| 276-413, gnl|panTro1|chr19 (28927272-28927441) | |
| 276-413, gnl|rheMac2|chr16 (25450964-25451133) | |
| 276-413, gnl|rn3|chr10 (67162218-67162379) | |
| 276-413, gnl|tetNig1|chrUn_random (15091954-15091795) | |
| 276-413, gnl|xenTro1|scaffold_1849 (5612-5767) | |
| 526-658, gnl|bosTau2|chr19 (15737388-15737256) | |
| 526-658, gnl|canFam2|chr9 (47562671-47562834) | |
| 526-658, gnl|danRer3|chr15 (34859089-34859241) | |
| 526-658, gnl|dasNov1|scaffold_27887 (7380-7217) | |
| 526-658, gnl|echTel1|scaffold_293984 (11261-11094) | |
| 526-658, gnl|fr1|chrUn (168566870-168566720) | |
| 526-658, gnl|galGal2|chr19 (5786146-5786310) | |
| 526-658, gnl|hg17|chr17 (25561649-25561812) | |
| 526-658, gnl|Hg17|chr17 (25561790-25561658) | |
| 526-658, gnl|mm7|chr11 (77101560-77101397) | |
| 526-658, gnl|Mm7|chr11 (77101417-77101549) | |
| 526-658, gnl|monDom2|scaffold_86 (611530-611695) | |
| 526-658, gnl|oryCun1|scaffold_204035 (10466-10629) | |
| 526-658, gnl|panTro1|chr19 (28925054-28925217) | |
| 526-658, gnl|rheMac2|chr16 (25448094-25448257) | |
| 526-658, gnl|rn3|chr10 (67160338-67160501) | |
| 526-658, gnl|tetNig1|chrUn_random (15093092-15092929) | |
| 526-658, gnl|xenTro1|scaffold_1849 (946-1090) | |
| 757-858, gnl|bosTau2|chr19 (15734856-15734755) | |
| 757-858, gnl|canFam2|chr9 (47559539-47559640) | |
| 757-858, gnl|danRer3|chr15 (34858216-34858312) | |
| 757-858, gnl|dasNov1|scaffold_27887 (10429-10328) | |
| 757-858, gnl|echTel1|scaffold_321604 (338894-338794) | |
| 757-858, gnl|fr1|chrUn (168567238-168567143) | |
| 757-858, gnl|galGal2|chr19 (5784513-5784617) | |
| 757-858, gnl|hg17|chr17 (25558866-25558967) | |
| 757-858, gnl|Hg17|chr17 (25558977-25558876) | |
| 757-858, gnl|loxAfr1|scaffold_41110 (296-195) | |
| 757-858, gnl|mm7|chr11 (77104857-77104761) | |
| 757-858, gnl|Mm7|chr11 (77104749-77104850) | |
| 757-858, gnl|monDom2|scaffold_86 (608077-608178) | |
| 757-858, gnl|oryCun1|scaffold_204035 (6172-6272) | |
| 757-858, gnl|panTro1|chr19 (28922277-28922378) | |
| 757-858, gnl|rheMac2|chr16 (25444994-25445095) | |
| 757-858, gnl|rn3|chr10 (67157172-67157273) | |
| 757-858, gnl|tetNig1|chrUn_random (15093471-15093376) | |
| 757-858, gnl|xenTro1|scaffold_67 (2415968-2415867) |
| Aligned organism(s): 59 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 44-182, gnl|bosTau2|chr19 (15741077-15740939) | |
| 44-182, gnl|Hg17|chr17 (25567362-25567224) | |
| 44-182, gnl|Mm7|chr11 (77098202-77098340) | |
| 276-413, gnl|bosTau2|chr19 (15739439-15739302) | |
| 276-413, gnl|canFam2|chr9 (47564793-47564962) | |
| 276-413, gnl|danRer3|chr15 (34859777-34859948) | |
| 276-413, gnl|dasNov1|scaffold_190043 (4124-4268) | |
| 276-413, gnl|echTel1|scaffold_293984 (9233-9066) | |
| 276-413, gnl|fr1|chrUn (168565784-168565619) | |
| 276-413, gnl|galGal2|chr19 (5787490-5787647) | |
| 276-413, gnl|hg17|chr17 (25563866-25564035) | |
| 276-413, gnl|Hg17|chr17 (25564020-25563883) | |
| 276-413, gnl|loxAfr1|scaffold_26416 (6533-6698) | |
| 276-413, gnl|mm7|chr11 (77099962-77099805) | |
| 276-413, gnl|Mm7|chr11 (77099806-77099943) | |
| 276-413, gnl|monDom2|scaffold_86 (615117-615285) | |
| 276-413, gnl|oryCun1|scaffold_204035 (12908-13075) | |
| 276-413, gnl|panTro1|chr19 (28927272-28927441) | |
| 276-413, gnl|rheMac2|chr16 (25450964-25451133) | |
| 276-413, gnl|rn3|chr10 (67162218-67162379) | |
| 276-413, gnl|tetNig1|chrUn_random (15091954-15091795) | |
| 276-413, gnl|xenTro1|scaffold_1849 (5612-5767) | |
| 526-658, gnl|bosTau2|chr19 (15737388-15737256) | |
| 526-658, gnl|canFam2|chr9 (47562671-47562834) | |
| 526-658, gnl|danRer3|chr15 (34859089-34859241) | |
| 526-658, gnl|dasNov1|scaffold_27887 (7380-7217) | |
| 526-658, gnl|echTel1|scaffold_293984 (11261-11094) | |
| 526-658, gnl|fr1|chrUn (168566870-168566720) | |
| 526-658, gnl|galGal2|chr19 (5786146-5786310) | |
| 526-658, gnl|hg17|chr17 (25561649-25561812) | |
| 526-658, gnl|Hg17|chr17 (25561790-25561658) | |
| 526-658, gnl|mm7|chr11 (77101560-77101397) | |
| 526-658, gnl|Mm7|chr11 (77101417-77101549) | |
| 526-658, gnl|monDom2|scaffold_86 (611530-611695) | |
| 526-658, gnl|oryCun1|scaffold_204035 (10466-10629) | |
| 526-658, gnl|panTro1|chr19 (28925054-28925217) | |
| 526-658, gnl|rheMac2|chr16 (25448094-25448257) | |
| 526-658, gnl|rn3|chr10 (67160338-67160501) | |
| 526-658, gnl|tetNig1|chrUn_random (15093092-15092929) | |
| 526-658, gnl|xenTro1|scaffold_1849 (946-1090) | |
| 757-858, gnl|bosTau2|chr19 (15734856-15734755) | |
| 757-858, gnl|canFam2|chr9 (47559539-47559640) | |
| 757-858, gnl|danRer3|chr15 (34858216-34858312) | |
| 757-858, gnl|dasNov1|scaffold_27887 (10429-10328) | |
| 757-858, gnl|echTel1|scaffold_321604 (338894-338794) | |
| 757-858, gnl|fr1|chrUn (168567238-168567143) | |
| 757-858, gnl|galGal2|chr19 (5784513-5784617) | |
| 757-858, gnl|hg17|chr17 (25558866-25558967) | |
| 757-858, gnl|Hg17|chr17 (25558977-25558876) | |
| 757-858, gnl|loxAfr1|scaffold_41110 (296-195) | |
| 757-858, gnl|mm7|chr11 (77104857-77104761) | |
| 757-858, gnl|Mm7|chr11 (77104749-77104850) | |
| 757-858, gnl|monDom2|scaffold_86 (608077-608178) | |
| 757-858, gnl|oryCun1|scaffold_204035 (6172-6272) | |
| 757-858, gnl|panTro1|chr19 (28922277-28922378) | |
| 757-858, gnl|rheMac2|chr16 (25444994-25445095) | |
| 757-858, gnl|rn3|chr10 (67157172-67157273) | |
| 757-858, gnl|tetNig1|chrUn_random (15093471-15093376) | |
| 757-858, gnl|xenTro1|scaffold_67 (2415968-2415867) |