Non-Coding RNA Search

Lng1-LNG010020D08

Sequence:


               
               AGAAGTGGCCAACTTGGTACAGGACACCCTGGGCAGTCTGCCCACAATCGTGCACGTGGA
CGACGCCCTGCAGGCTGTCAAACTTCAGTGCATTGGCAAAACCGTGGAAAGCCAGCTCTA
TACCAACCCAGGTAAGGCGGTGGGTGTCTTGAATGAAACAATGTCCCTAGAAAGCCGTTT
TTTACATCTTCCAGCCATAGGTTAGCAGAAGCAATTTTAAAAAAGGAAACTAGAAACTGC
GTTCTCAAAGGCATTATTTATTTGGATTGTTAGAATGCATGTATTAAATAGCCAGATAAA
AAAATACGACTATTAAAAATTTATTTCTAGAAAGAATGAAACCTCTAATGATTAAATTGA
TTCTAATCATAACAGGTTGTAGCATAGGGTATGCTTTTTTCCTTGTTAAGAGAGGGAGGG
GAGTCCTGCTTCTGGAGTTCCCTGGTGGTCTAATGGTTAGGATTCAGCACTTTCACCACT
GTGGCCATGGTTCAGTCCCTGGTCTGGTAACTGAGATGCCACATCAAGCTGCTGCACACC
CCAACCAAAAAagagagagaaagagagagagaaagagggagagagaaagaaagaaaggaa
ggaaggaaggaaggaaggaaggaaggaaggaagagagagagagagagagaaagaaagaaa
gaaagaAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAATAGGCCCTTCT
GTGTATACTTGCTTCCCTCATAGAAATTTTCTCTATTggagttcctgttgtggcacagca
gaaacaaatccgactagtaaccatgagattgcaggtttgatccctggcctcACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAGTGGCCAACTTGGTACAGGACACCCTGGGCAGTCTGCCCACAATCGTGCACGTGGA
CGACGCCCTGCAGGCTGTCAAACTTCAGTGCATTGGCAAAACCGTGGAAAGCCAGCTCTA
TACCAACCCAGGTAAGGCGGTGGGTGTCTTGAATGAAACAATGTCCCTAGAAAGCCGTTT
TTTACATCTTCCAGCCATAGGTTAGCAGAAGCAATTTTAAAAAAGGAAACTAGAAACTGC
GTTCTCAAAGGCATTATTTATTTGGATTGTTAGAATGCATGTATTAAATAGCCAGATAAA
AAAATACGACTATTAAAAATTTATTTCTAGAAAGAATGAAACCTCTAATGATTAAATTGA
TTCTAATCATAACAGGTTGTAGCATAGGGTATGCTTTTTTCCTTGTTAAGAGAGGGAGGG
GAGTCCTGCTTCTGGAGTTCCCTGGTGGTCTAATGGTTAGGATTCAGCACTTTCACCACT
GTGGCCATGGTTCAGTCCCTGGTCTGGTAACTGAGATGCCACATCAAGCTGCTGCACACC
CCAACCAAAAAagagagagaaagagagagagaaagagggagagagaaagaaagaaaggaa
ggaaggaaggaaggaaggaaggaaggaaggaagagagagagagagagagaaagaaagaaa
gaaagaAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAATAGGCCCTTCT
GTGTATACTTGCTTCCCTCATAGAAATTTTCTCTATTggagttcctgttgtggcacagca
gaaacaaatccgactagtaaccatgagattgcaggtttgatccctggcctcACT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               2-120, - strand, RNAz p=0.50764

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               2-120, - strand, RNAz p=0.50764

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-405, gnl|bosTau2|chr4 (28678095-28678498)
               

               
               2-405, gnl|Hg17|chr7 (111097508-111097160)
               


               
               434-586, gnl|bosTau2|chr19 (42148657-42148809)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-405, gnl|bosTau2|chr4 (28678095-28678498)
               

               
               2-405, gnl|Hg17|chr7 (111097508-111097160)
               


               
               434-586, gnl|bosTau2|chr19 (42148657-42148809)

	2-405, gnl\|bosTau2\|chr4 (28678095-28678498)
	2-405, gnl\|Hg17\|chr7 (111097508-111097160)

	434-586, gnl\|bosTau2\|chr19 (42148657-42148809)