Non-Coding RNA Search

Lng1-LNG010020D10

Sequence:


               
               TGGCACTTCCAGGCTCCCTGAGAGAGAGGAGTGAGGTCTAGTGAAGCCTGTTCTGGGCTG
GGAGAGGAAAGGAGGAAGCATTTGCCAGCTCTGCTGTACAGGCTCCTATACCTATTACTG
ACTTGCATTTTTTTAAGGGACAACATAAAAAAATAGAGCTGAACCGGTGTAAGGGTCAGG
AAATCTACCTTAAAACTATCTCTGACAGGGGCAAATATGATGACGAGGTACATGCTTCTG
TGTAACTGTCATTTGGGTAGGCCAGAAGAGTCTTCCCTATGTTATTTTAATCACAGAACC
TAAATAAATGACAAGTACACCCACTCCCTAAACAGCTGGGTTAGAGCAGTTATTCATGCA
CTAGACTTTCGATTTCTGTTGAATGATTCTTCAACTGAAACCTTCTAAGCTCCTAGGTGA
GGAAGGCCTTTACCTCAGATGAAGTGCAATAGTTAGCGTACTGAGCACCTAATATGAGAC
AGCAGCTTCATATTATAACCCTGAAAAGTAGCTATCATAACTCCCATTTGACAGAAAAGG
AAACAGAAGCTAAGAGAAATCAAGTACCTTGCCCAAGGGCACATTGTTCGCAGGTGGTAG
ATCTGGGATTCAAAACCAGATCTTATTGGGTCCAAATCTTGCAATTTTTCCTTTCCAAAA
CTTCTAATGCGGCCTCTCAAATTTCTTGAGGCAGTAAGAAATGTATAGCAAAGGGATCAG
AAGCTTATCTCCATAATTTCAGAGTTTTGAAGTTCTCCTCTTTCCCTACCTAAATGCAGA
TGTTCTGCCAAATCTCCCATCAACACAAAACTTGAAAATTTGCCATGTATTGCCGAANG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGCACTTCCAGGCTCCCTGAGAGAGAGGAGTGAGGTCTAGTGAAGCCTGTTCTGGGCTG
GGAGAGGAAAGGAGGAAGCATTTGCCAGCTCTGCTGTACAGGCTCCTATACCTATTACTG
ACTTGCATTTTTTTAAGGGACAACATAAAAAAATAGAGCTGAACCGGTGTAAGGGTCAGG
AAATCTACCTTAAAACTATCTCTGACAGGGGCAAATATGATGACGAGGTACATGCTTCTG
TGTAACTGTCATTTGGGTAGGCCAGAAGAGTCTTCCCTATGTTATTTTAATCACAGAACC
TAAATAAATGACAAGTACACCCACTCCCTAAACAGCTGGGTTAGAGCAGTTATTCATGCA
CTAGACTTTCGATTTCTGTTGAATGATTCTTCAACTGAAACCTTCTAAGCTCCTAGGTGA
GGAAGGCCTTTACCTCAGATGAAGTGCAATAGTTAGCGTACTGAGCACCTAATATGAGAC
AGCAGCTTCATATTATAACCCTGAAAAGTAGCTATCATAACTCCCATTTGACAGAAAAGG
AAACAGAAGCTAAGAGAAATCAAGTACCTTGCCCAAGGGCACATTGTTCGCAGGTGGTAG
ATCTGGGATTCAAAACCAGATCTTATTGGGTCCAAATCTTGCAATTTTTCCTTTCCAAAA
CTTCTAATGCGGCCTCTCAAATTTCTTGAGGCAGTAAGAAATGTATAGCAAAGGGATCAG
AAGCTTATCTCCATAATTTCAGAGTTTTGAAGTTCTCCTCTTTCCCTACCTAAATGCAGA
TGTTCTGCCAAATCTCCCATCAACACAAAACTTGAAAATTTGCCATGTATTGCCGAANG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               546-646, + strand, RNAz p=0.970771

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               546-646, + strand, RNAz p=0.970771

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               46-837, gnl|bosTau2|chr8 (32851224-32852041)
               

               
               46-837, gnl|Hg17|chr9 (97456696-97457479)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               46-837, gnl|bosTau2|chr8 (32851224-32852041)
               

               
               46-837, gnl|Hg17|chr9 (97456696-97457479)

	46-837, gnl\|bosTau2\|chr8 (32851224-32852041)
	46-837, gnl\|Hg17\|chr9 (97456696-97457479)