Non-Coding RNA Search

Lng1-LNG010022C07

Sequence:


               
               TACTGTATACGCGCGGTGCTATCCCCCTCCTCCAACTCTGGAATTTGTTGTAACAGTTTT
AGTTGAGTCCTGTATTTTCCAGGTAGACAGTTATATTATCTGCAAATAATGACCATTTGT
ATTTCTTCTTTTTCCATGCCTCTTGTCAGGTACATAGTTTTGTGAATATTATATCATCAT
TTCTCAGGAAGTCTGACCTGTCAGTTTTTTCTTTAGCACTGGAACCTATTGCCATTTCTT
CTTGGGAGTGGATGAAGCTTGGGTTTAGAGGCCATGTAGATGGAAAATAGAGTGTAGAAA
CTCTTCACCAACATATCTTGTTAAAGTCCATAGATTGACTGAACATATGTTACTCCACTG
TATTTTGAGTTTTTGTTTTTGATATGGTTGATATTTTCTATCCCTATTAATTCTGCTGAA
TTTATTTATCCCTATTGCTGAAGTTATTACGTTTCCGCTTACTGAGTGGAATTGGCACCT
TTGGGAGAAACAGTCTCTACTTCAAGCCTCCTCTCGTTTAGCCTGGGGTCTTATAGCCTT
GACCAAGCTGCCCTTTTACCACTGGTTAAAATGGAAAATATCCATTCTGTGTTTCTATAG
AGGAATTTCCCAGCTGCTGCACTGCACCCCTCTATGGGACAGCAGTAAGCCTGCTTTGTT
GCCCTTATTTGATAGAGTTGCTGTGAGAGAGTGAGCATTGGGAACCCCAGCCTCTGGACA
CTGTAACCAGGCCTGACCTCCTAGGTGGCTTACATGCACCATCCTGTCCTGATGCACATG
GGCTGATAGAGGCCCAGTGTGCCTGAGTGCACGTGTGTGTGTGTTTGTGTGTGTGTGGGG
GGGGTGCAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACTGTATACGCGCGGTGCTATCCCCCTCCTCCAACTCTGGAATTTGTTGTAACAGTTTT
AGTTGAGTCCTGTATTTTCCAGGTAGACAGTTATATTATCTGCAAATAATGACCATTTGT
ATTTCTTCTTTTTCCATGCCTCTTGTCAGGTACATAGTTTTGTGAATATTATATCATCAT
TTCTCAGGAAGTCTGACCTGTCAGTTTTTTCTTTAGCACTGGAACCTATTGCCATTTCTT
CTTGGGAGTGGATGAAGCTTGGGTTTAGAGGCCATGTAGATGGAAAATAGAGTGTAGAAA
CTCTTCACCAACATATCTTGTTAAAGTCCATAGATTGACTGAACATATGTTACTCCACTG
TATTTTGAGTTTTTGTTTTTGATATGGTTGATATTTTCTATCCCTATTAATTCTGCTGAA
TTTATTTATCCCTATTGCTGAAGTTATTACGTTTCCGCTTACTGAGTGGAATTGGCACCT
TTGGGAGAAACAGTCTCTACTTCAAGCCTCCTCTCGTTTAGCCTGGGGTCTTATAGCCTT
GACCAAGCTGCCCTTTTACCACTGGTTAAAATGGAAAATATCCATTCTGTGTTTCTATAG
AGGAATTTCCCAGCTGCTGCACTGCACCCCTCTATGGGACAGCAGTAAGCCTGCTTTGTT
GCCCTTATTTGATAGAGTTGCTGTGAGAGAGTGAGCATTGGGAACCCCAGCCTCTGGACA
CTGTAACCAGGCCTGACCTCCTAGGTGGCTTACATGCACCATCCTGTCCTGATGCACATG
GGCTGATAGAGGCCCAGTGTGCCTGAGTGCACGTGTGTGTGTGTTTGTGTGTGTGTGGGG
GGGGTGCAGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               499-610, + strand, RNAz p=0.992608

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               499-610, + strand, RNAz p=0.992608

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               2-610, gnl|bosTau2|chr26 (16512353-16511766)
               

               
               2-610, gnl|Hg17|chr10 (103382757-103382159)
               


               
               629-792, gnl|bosTau2|chr26 (16511767-16511611)
               

               
               629-792, gnl|Hg17|chr10 (103382160-103381982)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-610, gnl|bosTau2|chr26 (16512353-16511766)
               

               
               2-610, gnl|Hg17|chr10 (103382757-103382159)
               


               
               629-792, gnl|bosTau2|chr26 (16511767-16511611)
               

               
               629-792, gnl|Hg17|chr10 (103382160-103381982)

	2-610, gnl\|bosTau2\|chr26 (16512353-16511766)
	2-610, gnl\|Hg17\|chr10 (103382757-103382159)

	629-792, gnl\|bosTau2\|chr26 (16511767-16511611)
	629-792, gnl\|Hg17\|chr10 (103382160-103381982)