Non-Coding RNA Search

Lng1-LNG010023E09

Sequence:


               
               CTTAAGCTTCGGTTTGCTCATCTGCAAAATTAGGAATCATATAGCATCTGCCTCATAGAA
TTGTGAGATTTAAAGGGGGTAATGCTTATAAATGCCTAGAAAAATAAGCACTCAGTACAG
GTTAGCTCCTATTCCACTCACTGCAGTGACCACATGGGAATGCGCCTGGAGGAGGGCCTG
ACACACAGGTGACCTACAAACCATGTTGGTTTTTCTCCCATCCTCCTGAACTGACCTGAA
CATAATGGAGCATCACTGATACTGCTTTGCAGATGCTGGCATAAGGTTAGGGAGAGTTCT
CCCACACCTGCACCCCTTTCCTTGCTGCTCATTTTTCTCCATTCTCCTGGTTTCCCCTTA
TAACAGATCACTCTTGCAAGTGACAGAGAGAGACACCTCTTTCTGTCACAGAACTCAGTC
AGCTACAGGGAGACAGATTCTTGGCCTGGGCTGACTAGCATTTGTATTCTGTTCATGTGA
GCTGCATCAGAGGGCATCCAGAGGGGAAGTACCTCCCCAACTGTGACAGACAATCAAGCA
GAATGACAGAGCCAGGTGCACTTACTGATATTCCCAACACCAACCCCAAATTACAGCACA
TTACTGCCAACTTCTGAGAAAGTCAGAGTTATGTTGCTTCCGGTACATTTAACGAGGATG
ACTTTTAACTTTTAAAGGAAGAACAATTCAGCAAGCAAGCAGACAGCACAGGCTTTTAAG
GTTCTTATTTCACAAGACGAACACCTGAATTTTACCCCAGGCCTATGTGTGGCAGAGATA
GCCATGTTTTTCAAACTACAGGTCTCAACTCATGAGTGAGTTATGAAGTCAAGTGGGTTG
AGACCAGCATTTTTACAAAATGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTAAGCTTCGGTTTGCTCATCTGCAAAATTAGGAATCATATAGCATCTGCCTCATAGAA
TTGTGAGATTTAAAGGGGGTAATGCTTATAAATGCCTAGAAAAATAAGCACTCAGTACAG
GTTAGCTCCTATTCCACTCACTGCAGTGACCACATGGGAATGCGCCTGGAGGAGGGCCTG
ACACACAGGTGACCTACAAACCATGTTGGTTTTTCTCCCATCCTCCTGAACTGACCTGAA
CATAATGGAGCATCACTGATACTGCTTTGCAGATGCTGGCATAAGGTTAGGGAGAGTTCT
CCCACACCTGCACCCCTTTCCTTGCTGCTCATTTTTCTCCATTCTCCTGGTTTCCCCTTA
TAACAGATCACTCTTGCAAGTGACAGAGAGAGACACCTCTTTCTGTCACAGAACTCAGTC
AGCTACAGGGAGACAGATTCTTGGCCTGGGCTGACTAGCATTTGTATTCTGTTCATGTGA
GCTGCATCAGAGGGCATCCAGAGGGGAAGTACCTCCCCAACTGTGACAGACAATCAAGCA
GAATGACAGAGCCAGGTGCACTTACTGATATTCCCAACACCAACCCCAAATTACAGCACA
TTACTGCCAACTTCTGAGAAAGTCAGAGTTATGTTGCTTCCGGTACATTTAACGAGGATG
ACTTTTAACTTTTAAAGGAAGAACAATTCAGCAAGCAAGCAGACAGCACAGGCTTTTAAG
GTTCTTATTTCACAAGACGAACACCTGAATTTTACCCCAGGCCTATGTGTGGCAGAGATA
GCCATGTTTTTCAAACTACAGGTCTCAACTCATGAGTGAGTTATGAAGTCAAGTGGGTTG
AGACCAGCATTTTTACAAAATGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               736-863, + strand, RNAz p=0.99441

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               736-863, + strand, RNAz p=0.99441

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               113-863, gnl|bosTau2|chr20 (6629134-6628392)
               

               
               113-863, gnl|Hg17|chr5 (71759910-71759170)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               113-863, gnl|bosTau2|chr20 (6629134-6628392)
               

               
               113-863, gnl|Hg17|chr5 (71759910-71759170)

	113-863, gnl\|bosTau2\|chr20 (6629134-6628392)
	113-863, gnl\|Hg17\|chr5 (71759910-71759170)