Non-Coding RNA Search

Lng1-LNG010024B01

Sequence:


               
               TTATAGGTGGGGAAACAGAGGCCCCAATGATAACCCCAACACATTCTGAAATTTCCTCCC
CTAATCTCAGGCCATGGGCTAAATTCTGGGGTCACTGCTGTGAACCAAACATAGTCCCTG
ACCTGGAGTGTAGCCTGGTGGAAGCTCAGAAAGAACTCCCACTTTCCCCATATATGGCGC
CTACCTGTTGTTATAAATCTAGAATTGGGCTTCCTAATTTGTCAGAGGGATTTTGTTTGA
ATTCATGAACTTCTGTGGAAAGACTGGAAAGCCGATAGCATTAGCCATTGAATCCCCTTT
GTTATTAGAATGTCACGTGCAGGTGGCACTGTGTAACACCAACCACATATCATAGGACAG
CTCAGAGTCCCAAATCCCAAATCCTGTGGCCTGGGACTCTTGCAGGACCCAGCGTCTGCC
TCAGGCTTCTAGAGGCATCCTCAGGGAATCCTAAAGTGCCGCCTTCTGCCCTTGGACGGC
CTCAGCCTCCCCAGGGCAGGTGACTCGGGGCTTAGCTTATAAGTCTCAGCTTTTACGTCT
CCTTTATAGATGGTGACCCTGGGGCTCAGCTGGGCCTTGCAGGGGGTTTGGCTGAGCAGG
GCCTGGGTCTCAGTTCCCCTAGTAGGGCTCCTGTTCTTTCTGTGCCTTCCTGGCTGAGCA
ATTTCAGCTGCACGGGGTGGGGGGGGGGTGGAGTGGGGCCCAGGTCTTCTCTTCCCAGAG
GGGAACTGCGGTGGTGAATGAACGTGCTTTCTGTTTTCTTCCTCTCTGAACTCTCTCCTG
ACCACCTCTCCCGCCTCCTCTGACCCACCCAGCCTGTTGGGAGATCTGGCATCCAGGTAA
AGCCCCTCCCTTCAACTGGATCAACCCACCTTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTATAGGTGGGGAAACAGAGGCCCCAATGATAACCCCAACACATTCTGAAATTTCCTCCC
CTAATCTCAGGCCATGGGCTAAATTCTGGGGTCACTGCTGTGAACCAAACATAGTCCCTG
ACCTGGAGTGTAGCCTGGTGGAAGCTCAGAAAGAACTCCCACTTTCCCCATATATGGCGC
CTACCTGTTGTTATAAATCTAGAATTGGGCTTCCTAATTTGTCAGAGGGATTTTGTTTGA
ATTCATGAACTTCTGTGGAAAGACTGGAAAGCCGATAGCATTAGCCATTGAATCCCCTTT
GTTATTAGAATGTCACGTGCAGGTGGCACTGTGTAACACCAACCACATATCATAGGACAG
CTCAGAGTCCCAAATCCCAAATCCTGTGGCCTGGGACTCTTGCAGGACCCAGCGTCTGCC
TCAGGCTTCTAGAGGCATCCTCAGGGAATCCTAAAGTGCCGCCTTCTGCCCTTGGACGGC
CTCAGCCTCCCCAGGGCAGGTGACTCGGGGCTTAGCTTATAAGTCTCAGCTTTTACGTCT
CCTTTATAGATGGTGACCCTGGGGCTCAGCTGGGCCTTGCAGGGGGTTTGGCTGAGCAGG
GCCTGGGTCTCAGTTCCCCTAGTAGGGCTCCTGTTCTTTCTGTGCCTTCCTGGCTGAGCA
ATTTCAGCTGCACGGGGTGGGGGGGGGGTGGAGTGGGGCCCAGGTCTTCTCTTCCCAGAG
GGGAACTGCGGTGGTGAATGAACGTGCTTTCTGTTTTCTTCCTCTCTGAACTCTCTCCTG
ACCACCTCTCCCGCCTCCTCTGACCCACCCAGCCTGTTGGGAGATCTGGCATCCAGGTAA
AGCCCCTCCCTTCAACTGGATCAACCCACCTTCCT

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

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               41-160, - strand, RNAz p=0.782305
               

               
               355-586, + strand, RNAz p=0.999016

Predicted RNA structure(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               41-160, - strand, RNAz p=0.782305
               

               
               355-586, + strand, RNAz p=0.999016

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-875, gnl|bosTau2|chr15 (34934165-34933321)
               

               
               1-875, gnl|Hg17|chr11 (74661122-74660355)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-875, gnl|bosTau2|chr15 (34934165-34933321)
               

               
               1-875, gnl|Hg17|chr11 (74661122-74660355)

	41-160, - strand, RNAz p=0.782305
	355-586, + strand, RNAz p=0.999016

	1-875, gnl\|bosTau2\|chr15 (34934165-34933321)
	1-875, gnl\|Hg17\|chr11 (74661122-74660355)