Lng1-LNG010024E02
|
ACGCCGAGTTATTCCTGGCGTATTTCTTACGTCTTTATTTAGTCTTAAAAAAGCAGGGCG
TGCTCCACTCAACAGAATCGGAAACCCAGGTGCGTCTCTGCCGTGAGCGGGCAGTGCCCG
CCCCAAGGCGCTGCTCGGGCCAGCGGGGAGGGCTTTACAAAGGCGTGAGCCTCCACGGGA
ACCGGCCAGACCCTGGGGAGCTCTCTGACCCCCAGGAGGGTCTGGCCTTTGGACTGGACC
ACGCCCGCCCCTCAGCAACCCCTCCGCCGGCTCTTGCCTTGGCGTTCCGGGCTCCAAAAC
GGACCTATCCAACCCCCTTGCATCAGGAATTAGCAGCCGCTTAGGGGACTGGCTGCCCTG
AACGCGGCAGATGTCTTGAACCCTGCACCTGGTCCAGCGGGGTCTGAACTGGCTCTGAGA
GGAGCCTGCGGCTGCAGGAAGGTCTCGCCCGAGACCCGCACCCTGCCTGCCGGCTTGGTG
TCAGGCACTGCCCTTCCAGCTGGGACGTGGACCCGGGACTCCCCCTGCGTCTCCCCACCC
TGGCGTGGACCCCTGGTTCCTAGAGCTGGACTCCTGGCGCAGGTTGGGCTGGCCCTGTTC
CTTTCCGAGCGGAAGCTAAGGGCGCCTCGGCCAGCTTTCCGCGCAGCGGGGATGTGCCTT
CCGGGGCCAGATGAACCTGCGTCGCTTAGACTTGTCTTCCAAACAGCTGGGTGCAGAAAT
TACAGCTTCCTGGTGACAATCGGCTCCACTTGGCATGGCCACCCAACATGTCCCTAATAA
CTGAATTGTTTATTTAATAGAGCAATCACAGCCAGTTGGAGGTTTAAACCGCGCTCCCCC
GAAACCCAGTGAGCTCAGCCCCTGGGGGCTGTGTAGCGCTGACCCTGA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACGCCGAGTTATTCCTGGCGTATTTCTTACGTCTTTATTTAGTCTTAAAAAAGCAGGGCG
TGCTCCACTCAACAGAATCGGAAACCCAGGTGCGTCTCTGCCGTGAGCGGGCAGTGCCCG
CCCCAAGGCGCTGCTCGGGCCAGCGGGGAGGGCTTTACAAAGGCGTGAGCCTCCACGGGA
ACCGGCCAGACCCTGGGGAGCTCTCTGACCCCCAGGAGGGTCTGGCCTTTGGACTGGACC
ACGCCCGCCCCTCAGCAACCCCTCCGCCGGCTCTTGCCTTGGCGTTCCGGGCTCCAAAAC
GGACCTATCCAACCCCCTTGCATCAGGAATTAGCAGCCGCTTAGGGGACTGGCTGCCCTG
AACGCGGCAGATGTCTTGAACCCTGCACCTGGTCCAGCGGGGTCTGAACTGGCTCTGAGA
GGAGCCTGCGGCTGCAGGAAGGTCTCGCCCGAGACCCGCACCCTGCCTGCCGGCTTGGTG
TCAGGCACTGCCCTTCCAGCTGGGACGTGGACCCGGGACTCCCCCTGCGTCTCCCCACCC
TGGCGTGGACCCCTGGTTCCTAGAGCTGGACTCCTGGCGCAGGTTGGGCTGGCCCTGTTC
CTTTCCGAGCGGAAGCTAAGGGCGCCTCGGCCAGCTTTCCGCGCAGCGGGGATGTGCCTT
CCGGGGCCAGATGAACCTGCGTCGCTTAGACTTGTCTTCCAAACAGCTGGGTGCAGAAAT
TACAGCTTCCTGGTGACAATCGGCTCCACTTGGCATGGCCACCCAACATGTCCCTAATAA
CTGAATTGTTTATTTAATAGAGCAATCACAGCCAGTTGGAGGTTTAAACCGCGCTCCCCC
GAAACCCAGTGAGCTCAGCCCCTGGGGGCTGTGTAGCGCTGACCCTGA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
153-359, - strand, RNAmicro p=0.999398 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
153-359, - strand, RNAmicro p=0.999398 |
|
1-448, gnl|bosTau2|chr19 (21465663-21465206) |
|
1-448, gnl|Hg17|chr17 (9090014-9089181) |
| |
|
574-868, gnl|bosTau2|chr19 (21464832-21464532) |
|
574-868, gnl|canFam2|chr5 (36823364-36823629) |
|
574-868, gnl|hg17|chr17 (9088656-9088956) |
|
574-868, gnl|Hg17|chr17 (9088955-9088654) |
|
574-868, gnl|loxAfr1|scaffold_140864 (4819-5110) |
|
574-868, gnl|mm7|chr11 (68290379-68290130) |
|
574-868, gnl|monDom2|scaffold_66 (7281621-7281313) |
|
574-868, gnl|panTro1|chr19_random (29346093-29345793) |
|
574-868, gnl|rheMac2|chr16 (8996690-8996990) |
|
574-868, gnl|rn3|chr10 (54960045-54959794) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-448, gnl|bosTau2|chr19 (21465663-21465206) |
|
1-448, gnl|Hg17|chr17 (9090014-9089181) |
| |
|
574-868, gnl|bosTau2|chr19 (21464832-21464532) |
|
574-868, gnl|canFam2|chr5 (36823364-36823629) |
|
574-868, gnl|hg17|chr17 (9088656-9088956) |
|
574-868, gnl|Hg17|chr17 (9088955-9088654) |
|
574-868, gnl|loxAfr1|scaffold_140864 (4819-5110) |
|
574-868, gnl|mm7|chr11 (68290379-68290130) |
|
574-868, gnl|monDom2|scaffold_66 (7281621-7281313) |
|
574-868, gnl|panTro1|chr19_random (29346093-29345793) |
|
574-868, gnl|rheMac2|chr16 (8996690-8996990) |
|
574-868, gnl|rn3|chr10 (54960045-54959794) |
