Non-Coding RNA Search

Lng1-LNG010025G09

Sequence:


               
               TTCTTACTGGTTTTTCTTGTCCGTAAAAGCAGCTGTTTGGAGAACTGTGTTTGTCACCTT
TGATCTAATACAGCATGTCTTTTATACCTTTGCTTAGACTGGGCTTTCCTCAACCCTGGC
GCTGGTGACATTGAACccgggttatgctttgaggtggggggctgtcctgtgcattgcagg
acgttgagcagcatccttggcctctacccaccacatgccagtagcacccctcccctcccc
cttatgacagccaaaaatgtttccagatgttgccaaaagtcccctcggggaggggggcaa
aattgtccctagttgagaaccactgGCCTGGGCTGTTCTCACTCCCTGGAATGTCCTCCT
CCTTCCCTCCTCTCTGCCCTCATTCCCTGCCTGTCACTCTCTCACTCATCCTGTGAGACC
AGTTCTGAGGTCTTTCCCAGTCCTCCAAGGCAGGGGTTAACTGGACCAAACCCCTGCTCC
CAGGATCCACGGGCACTTGGCCATAACAGTGAGAGGACTGACCACCTTACCAACCATGTT
GTGTGGTTGGTCTCTGCACACCTGCCCTCCTGCTGCCAAACGGTGAGACCCTCAAAGCCA
GGGAGCCCGCCCAGAGGTGCCTCCAGCTGTGCGTGCCTTTGAAACTCATACAGTTGGGCA
GAGGGCACCGTCTCTAAGACAAAGAAGGTGAATGAGTGCCACTGAGATGCACGGCTTTTG
CAGGGGCCAATGCAAGTGCGTGGCTATGGAGCACACCTACCTCCTGGGCTCTTGTGTTCT
CTGTCGTGCCACAGAATTGGGCACCTCTGTGTCTGATATATTTTANGATGAGTGAACCAA
GCCATCACATGTTGGCTGATTATTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCTTACTGGTTTTTCTTGTCCGTAAAAGCAGCTGTTTGGAGAACTGTGTTTGTCACCTT
TGATCTAATACAGCATGTCTTTTATACCTTTGCTTAGACTGGGCTTTCCTCAACCCTGGC
GCTGGTGACATTGAACccgggttatgctttgaggtggggggctgtcctgtgcattgcagg
acgttgagcagcatccttggcctctacccaccacatgccagtagcacccctcccctcccc
cttatgacagccaaaaatgtttccagatgttgccaaaagtcccctcggggaggggggcaa
aattgtccctagttgagaaccactgGCCTGGGCTGTTCTCACTCCCTGGAATGTCCTCCT
CCTTCCCTCCTCTCTGCCCTCATTCCCTGCCTGTCACTCTCTCACTCATCCTGTGAGACC
AGTTCTGAGGTCTTTCCCAGTCCTCCAAGGCAGGGGTTAACTGGACCAAACCCCTGCTCC
CAGGATCCACGGGCACTTGGCCATAACAGTGAGAGGACTGACCACCTTACCAACCATGTT
GTGTGGTTGGTCTCTGCACACCTGCCCTCCTGCTGCCAAACGGTGAGACCCTCAAAGCCA
GGGAGCCCGCCCAGAGGTGCCTCCAGCTGTGCGTGCCTTTGAAACTCATACAGTTGGGCA
GAGGGCACCGTCTCTAAGACAAAGAAGGTGAATGAGTGCCACTGAGATGCACGGCTTTTG
CAGGGGCCAATGCAAGTGCGTGGCTATGGAGCACACCTACCTCCTGGGCTCTTGTGTTCT
CTGTCGTGCCACAGAATTGGGCACCTCTGTGTCTGATATATTTTANGATGAGTGAACCAA
GCCATCACATGTTGGCTGATTATTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               239-553, - strand, RNAz p=0.933616

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               239-553, - strand, RNAz p=0.933616

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               199-837, gnl|bosTau2|chr19 (12141651-12141034)
               

               
               199-837, gnl|Hg17|chr17 (28222397-28221806)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               199-837, gnl|bosTau2|chr19 (12141651-12141034)
               

               
               199-837, gnl|Hg17|chr17 (28222397-28221806)

	199-837, gnl\|bosTau2\|chr19 (12141651-12141034)
	199-837, gnl\|Hg17\|chr17 (28222397-28221806)