Lng1-LNG010026D04
|
TATGAATTGGTAGAAGCATAGAGATATATGAGGAGAGGAATGCATATTATATGTATCCTT
AAATGTATTTCAAAATAAAGATAGATGGGAAGAGGTTTATATACACATAGTCTCCAGTTT
AACGGGTTTCTTTCCACCCCTACCTCTCTTTAAAATCAATCAATCAATCAGAGCTCCAGT
TACAATTCTAGGGCCCTAGTGCCCTTAAGCACCTTCTACTTTAATTAGCCCCAGGCTCCT
GCCTCGGCTGAGACCACCCATGTGGCAGTCAGAGCATCAAGGCACAGAGGGATCAGGGGA
TTGATGCGTGTCACTTGGTCCAAAAGCACCAGTGACTTGCAACTGGAAAGGAGGTCTTAA
AGAGGACAAATTTCCCTTCCTAGGAATACCCTTGGACATGAACTTCATGTTAAACAGTGG
AACATGTGTTTGCTTAGAGTTATGGTATGAGAGGTCAGGAAGGAACCTTCTAGATCAATC
CAATCCATAGCTCTCATTTTAATAGCTGTGACATCCCCAGCCACATAGTCTGCTCCAAAG
ATGGAGGAAAGAGCAAACAGAGGACTTCCATGTGGCCAGAAGGAGGCAGGATGTAGCAGA
AAGAACATGGTTCCTTGAACTAGGCCGTGTTGTGTTCAAATCACAGATCTGAACTGCAGA
AAGTATAGAAACTGAGCCAGATCCCTAACCTTTCTGATCCTCAAGTTATGCAATGGAAAT
AATTGTATAAATCCACAGTTGTCATTGGTAGTTCAGAAATCCAAAACTGCCCTGAAAACC
AAAAGCATTTCCCAGTCCATTTGGTGACCAAGTCAGCCCCATCTGGGGCCAGCCTA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TATGAATTGGTAGAAGCATAGAGATATATGAGGAGAGGAATGCATATTATATGTATCCTT
AAATGTATTTCAAAATAAAGATAGATGGGAAGAGGTTTATATACACATAGTCTCCAGTTT
AACGGGTTTCTTTCCACCCCTACCTCTCTTTAAAATCAATCAATCAATCAGAGCTCCAGT
TACAATTCTAGGGCCCTAGTGCCCTTAAGCACCTTCTACTTTAATTAGCCCCAGGCTCCT
GCCTCGGCTGAGACCACCCATGTGGCAGTCAGAGCATCAAGGCACAGAGGGATCAGGGGA
TTGATGCGTGTCACTTGGTCCAAAAGCACCAGTGACTTGCAACTGGAAAGGAGGTCTTAA
AGAGGACAAATTTCCCTTCCTAGGAATACCCTTGGACATGAACTTCATGTTAAACAGTGG
AACATGTGTTTGCTTAGAGTTATGGTATGAGAGGTCAGGAAGGAACCTTCTAGATCAATC
CAATCCATAGCTCTCATTTTAATAGCTGTGACATCCCCAGCCACATAGTCTGCTCCAAAG
ATGGAGGAAAGAGCAAACAGAGGACTTCCATGTGGCCAGAAGGAGGCAGGATGTAGCAGA
AAGAACATGGTTCCTTGAACTAGGCCGTGTTGTGTTCAAATCACAGATCTGAACTGCAGA
AAGTATAGAAACTGAGCCAGATCCCTAACCTTTCTGATCCTCAAGTTATGCAATGGAAAT
AATTGTATAAATCCACAGTTGTCATTGGTAGTTCAGAAATCCAAAACTGCCCTGAAAACC
AAAAGCATTTCCCAGTCCATTTGGTGACCAAGTCAGCCCCATCTGGGGCCAGCCTA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-222, gnl|bosTau2|chr1 (84861514-84861287) |
|
1-222, gnl|Hg17|chr3 (144494681-144494473) |
|
1-222, gnl|Mm7|chr9 (94847061-94847249) |
| |
|
320-819, gnl|bosTau2|chr1 (84860917-84860451) |
|
320-819, gnl|canFam2|chr23 (41899346-41899693) |
|
320-819, gnl|dasNov1|scaffold_10476 (12994-13298) |
|
320-819, gnl|echTel1|scaffold_71699 (1516-1837) |
|
320-819, gnl|hg17|chr3 (144493809-144494186) |
|
320-819, gnl|Hg17|chr3 (144494349-144493822) |
|
320-819, gnl|loxAfr1|scaffold_4165 (10468-10790) |
|
320-819, gnl|mm7|chr9 (94847822-94847516) |
|
320-819, gnl|Mm7|chr9 (94847385-94847806) |
|
320-819, gnl|oryCun1|scaffold_188369 (80915-81249) |
|
320-819, gnl|panTro1|chr2 (147069983-147070360) |
|
320-819, gnl|rheMac2|chr2 (144570083-144569683) |
|
320-819, gnl|rn3|chr8 (100317789-100317475) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-222, gnl|bosTau2|chr1 (84861514-84861287) |
|
1-222, gnl|Hg17|chr3 (144494681-144494473) |
|
1-222, gnl|Mm7|chr9 (94847061-94847249) |
| |
|
320-819, gnl|bosTau2|chr1 (84860917-84860451) |
|
320-819, gnl|canFam2|chr23 (41899346-41899693) |
|
320-819, gnl|dasNov1|scaffold_10476 (12994-13298) |
|
320-819, gnl|echTel1|scaffold_71699 (1516-1837) |
|
320-819, gnl|hg17|chr3 (144493809-144494186) |
|
320-819, gnl|Hg17|chr3 (144494349-144493822) |
|
320-819, gnl|loxAfr1|scaffold_4165 (10468-10790) |
|
320-819, gnl|mm7|chr9 (94847822-94847516) |
|
320-819, gnl|Mm7|chr9 (94847385-94847806) |
|
320-819, gnl|oryCun1|scaffold_188369 (80915-81249) |
|
320-819, gnl|panTro1|chr2 (147069983-147070360) |
|
320-819, gnl|rheMac2|chr2 (144570083-144569683) |
|
320-819, gnl|rn3|chr8 (100317789-100317475) |
