Non-Coding RNA Search

Lng1-LNG010027H04

Sequence:


               
               TTAAAAAGAATCATTGATATCAAAACTAGAAGGCATGAGAAGAGAAGACAAATGCAGAAC
ATTGAAAATGCATTCAAAAATAAGAACTGAAgagttcccattgtggcgcagtggaaatga
atatgactaggaaccataagattgagggtttgatccctgaccttgctcagtgggttaaga
atccggcgttgccatgagctatggtgtaggtcagagatgcagcttagatgccgcatggct
gtgtctgtggtataggctggcaactgtagctcccatttgaccccctagcctgggaacttc
catatgctgtgggtgcagccctaaaaaagacAAAAAAAAAAAAAAAAAAAAAGAAAGAAG
CAGCAATCCAAACTCAACAATAAGGATAGTCAATAAATCAAGAGAAGACAAAAGAAGGAA
GAAAAAAAAAAGATCCAAAGTTACATCCAAAGCAATTAACAAAATGGCAATAAataccta
tctgtaattacacttaatgtaaatggactaaatgctccaaccaaaagacacacaggttga
gtggatacaaaataagacccatatacatgctgtttataagagacccacttcagacccaag
gacacacacagactgaaagtgagaagatggaatatactacatgaaaatgggaatcaaagg
aaagcaggagtaacaatactcacatcagacaaaatagactttaaaataaaaTCACAAGAG
ACAAAGAAGGACACTACATAGTGATCCAAGAATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAAAAAGAATCATTGATATCAAAACTAGAAGGCATGAGAAGAGAAGACAAATGCAGAAC
ATTGAAAATGCATTCAAAAATAAGAACTGAAgagttcccattgtggcgcagtggaaatga
atatgactaggaaccataagattgagggtttgatccctgaccttgctcagtgggttaaga
atccggcgttgccatgagctatggtgtaggtcagagatgcagcttagatgccgcatggct
gtgtctgtggtataggctggcaactgtagctcccatttgaccccctagcctgggaacttc
catatgctgtgggtgcagccctaaaaaagacAAAAAAAAAAAAAAAAAAAAAGAAAGAAG
CAGCAATCCAAACTCAACAATAAGGATAGTCAATAAATCAAGAGAAGACAAAAGAAGGAA
GAAAAAAAAAAGATCCAAAGTTACATCCAAAGCAATTAACAAAATGGCAATAAataccta
tctgtaattacacttaatgtaaatggactaaatgctccaaccaaaagacacacaggttga
gtggatacaaaataagacccatatacatgctgtttataagagacccacttcagacccaag
gacacacacagactgaaagtgagaagatggaatatactacatgaaaatgggaatcaaagg
aaagcaggagtaacaatactcacatcagacaaaatagactttaaaataaaaTCACAAGAG
ACAAAGAAGGACACTACATAGTGATCCAAGAATC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61886575|ref|XP_586939.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61886575|ref|XP_586939.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               435-545, - strand, RNAz p=0.527935

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               435-545, - strand, RNAz p=0.527935

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               321-754, gnl|bosTau2|chr10 (26596845-26597298)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               321-754, gnl|bosTau2|chr10 (26596845-26597298)