Non-Coding RNA Search

Lng1-LNG010029B04

Sequence:


               
               ATTGCAGTATTTAGAAATGCCTGTTATGATTAGAAGCCCAGGAAGAGACTCATTACTGAT
ATTCACTTTCAAGGCATCTTCTAATTCAGCAGGTTGCTTTAAGTAGAGAACTCAACTTGT
CTACATCCCTACCTCCTGCCTGGAAATCACTGGTAATTAGAAAAGGAGCCCATCTGAAAT
AACATAAAGAAATATTTGGAATGACACTTCCCCAATTGGGTTTCACAAAGCATTAGTAGA
TGTTTTGTGATAAAAGATGTTTCCATGGTTAGATGAGGGTGAGGGATGCAGCACTGCACC
TGTGTCCTTTCTGCAGGGTTTTCAGAGCCTTTAATTGACCAATGCACACTATGAGGTTCC
AAGAGGGAGAGACATGAGTTCATGATCTTACCTGACCACAAAACTCATTTTTCTGGGAAT
AGCTCTTCACATCTCTTGGAAATGCTATTCTTCCCAGCTTTTGGGGAAATCTTGCTCTGA
AGAGATGGGATCATCTTTCCAATATGATCAAGAATCTTAACATCTTTCTCATGCTAGGTG
GGAAATGAAAAAGTTTTGATGGAAATGCCAGGTAAATGATGCCAGCACTGAGAACAAGAA
GGGGTGGTAGGACAGAGGGTCACATAGGAATGGGAAAGAAGCTGCCCCCAAGACCTGCCG
GGTTAGCAGCACCTTTGTGGGGAGGCAGCCAAGATGGAGGAACACTGAGGACAGTGTCTG
AGAACTGGGCACTGGTGCCATGCCTGGAACTCTAGGAAATCATCAGTTGGCTGGGGTGAA
AGATTTGGGGTGAGATCTGCAGACCCACCCAGATAATTGCTTACTCAACCTTGTCAGTTA
AGCTCTGGAGACCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTGCAGTATTTAGAAATGCCTGTTATGATTAGAAGCCCAGGAAGAGACTCATTACTGAT
ATTCACTTTCAAGGCATCTTCTAATTCAGCAGGTTGCTTTAAGTAGAGAACTCAACTTGT
CTACATCCCTACCTCCTGCCTGGAAATCACTGGTAATTAGAAAAGGAGCCCATCTGAAAT
AACATAAAGAAATATTTGGAATGACACTTCCCCAATTGGGTTTCACAAAGCATTAGTAGA
TGTTTTGTGATAAAAGATGTTTCCATGGTTAGATGAGGGTGAGGGATGCAGCACTGCACC
TGTGTCCTTTCTGCAGGGTTTTCAGAGCCTTTAATTGACCAATGCACACTATGAGGTTCC
AAGAGGGAGAGACATGAGTTCATGATCTTACCTGACCACAAAACTCATTTTTCTGGGAAT
AGCTCTTCACATCTCTTGGAAATGCTATTCTTCCCAGCTTTTGGGGAAATCTTGCTCTGA
AGAGATGGGATCATCTTTCCAATATGATCAAGAATCTTAACATCTTTCTCATGCTAGGTG
GGAAATGAAAAAGTTTTGATGGAAATGCCAGGTAAATGATGCCAGCACTGAGAACAAGAA
GGGGTGGTAGGACAGAGGGTCACATAGGAATGGGAAAGAAGCTGCCCCCAAGACCTGCCG
GGTTAGCAGCACCTTTGTGGGGAGGCAGCCAAGATGGAGGAACACTGAGGACAGTGTCTG
AGAACTGGGCACTGGTGCCATGCCTGGAACTCTAGGAAATCATCAGTTGGCTGGGGTGAA
AGATTTGGGGTGAGATCTGCAGACCCACCCAGATAATTGCTTACTCAACCTTGTCAGTTA
AGCTCTGGAGACCC

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

Help | Less info


               
               159-278, - strand, RNAz p=0.603136
               

               
               427-546, - strand, RNAz p=0.911418

Predicted RNA structure(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               159-278, - strand, RNAz p=0.603136
               

               
               427-546, - strand, RNAz p=0.911418

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               80-658, gnl|bosTau2|chr24 (35741703-35742284)
               

               
               80-658, gnl|Hg17|chr18 (40873715-40874290)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               80-658, gnl|bosTau2|chr24 (35741703-35742284)
               

               
               80-658, gnl|Hg17|chr18 (40873715-40874290)

	159-278, - strand, RNAz p=0.603136
	427-546, - strand, RNAz p=0.911418

	80-658, gnl\|bosTau2\|chr24 (35741703-35742284)
	80-658, gnl\|Hg17\|chr18 (40873715-40874290)