Non-Coding RNA Search

Lng1-LNG010029D01

Sequence:


               
               ACCACGGGCGTTGTTGTGAAGTTAAATGAGATAAATTTGCAAAGGACTTACTTAGCACCT
CGTATAATATAAAAAAATAAGCTTTTGGCTCTTTTGAAACTTAGCTTATTAGCAGGTGAA
ACCATGTGAAATCGCTGTTTGTGGTGATTCAGAAGCAATCCAGTGTCCTCAGCCTTCACC
CTCACGGGCGGCCTTGCTAACAGCTTCTCAGAAGGAACCTGTTTGTTTGCAAATGGTTGT
GGAGGTTTTCCAAGGAAGACTTTTGCAGTGTTTGTGTCTCCCCCTGCGGGTGTGAGACTG
TCGTGTGTGTGGAGGGGAGTGTTCCACTGAAGAGGCCCCTGAACCTGGCTGCTCGTTTTC
TTGGTTCCCGTCCTCTCGCCCGTGTTCTCCATTCCCTCGTCCGCACACGCGTGGTCTTTC
AATTCCGTGTTCACCCGCATCCCTTGGTGTCTCCCAGGGCTCTGGTGCTCTGTGTGCGGA
CGGGCGCCGCACACGGCTCACGCTTTCTTTCCCCGATCAGGACGGCGGCCTCGTGGAAGA
GCCCACGACTTCACCATTTTTGCCTTCACCAAGCCTGAAGCTCCCCCTTTCCAACAGTGC
ACTCCCCAGTCAGGCCCTGGGCGGGATGGCCTCAGGGCTGGGCATGCAAAACTTGAATTC
TTCTAGACAGGTAAAGCTGTCGCTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCACGGGCGTTGTTGTGAAGTTAAATGAGATAAATTTGCAAAGGACTTACTTAGCACCT
CGTATAATATAAAAAAATAAGCTTTTGGCTCTTTTGAAACTTAGCTTATTAGCAGGTGAA
ACCATGTGAAATCGCTGTTTGTGGTGATTCAGAAGCAATCCAGTGTCCTCAGCCTTCACC
CTCACGGGCGGCCTTGCTAACAGCTTCTCAGAAGGAACCTGTTTGTTTGCAAATGGTTGT
GGAGGTTTTCCAAGGAAGACTTTTGCAGTGTTTGTGTCTCCCCCTGCGGGTGTGAGACTG
TCGTGTGTGTGGAGGGGAGTGTTCCACTGAAGAGGCCCCTGAACCTGGCTGCTCGTTTTC
TTGGTTCCCGTCCTCTCGCCCGTGTTCTCCATTCCCTCGTCCGCACACGCGTGGTCTTTC
AATTCCGTGTTCACCCGCATCCCTTGGTGTCTCCCAGGGCTCTGGTGCTCTGTGTGCGGA
CGGGCGCCGCACACGGCTCACGCTTTCTTTCCCCGATCAGGACGGCGGCCTCGTGGAAGA
GCCCACGACTTCACCATTTTTGCCTTCACCAAGCCTGAAGCTCCCCCTTTCCAACAGTGC
ACTCCCCAGTCAGGCCCTGGGCGGGATGGCCTCAGGGCTGGGCATGCAAAACTTGAATTC
TTCTAGACAGGTAAAGCTGTCGCTGGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               461-679, - strand, RNAz p=0.794388

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               461-679, - strand, RNAz p=0.794388

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               320-679, gnl|bosTau2|chr19 (47947695-47947334)
               

               
               320-679, gnl|Hg17|chr17 (73584656-73585019)
               

               
               320-679, gnl|Mm7|chr11 (117850497-117850872)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               320-679, gnl|bosTau2|chr19 (47947695-47947334)
               

               
               320-679, gnl|Hg17|chr17 (73584656-73585019)
               

               
               320-679, gnl|Mm7|chr11 (117850497-117850872)

	320-679, gnl\|bosTau2\|chr19 (47947695-47947334)
	320-679, gnl\|Hg17\|chr17 (73584656-73585019)
	320-679, gnl\|Mm7\|chr11 (117850497-117850872)