Non-Coding RNA Search

Lng1-LNG010029H09

Sequence:


               
               TATTTAGATCTTTAATCCCTTTTTAATTTTTTTTACatggagttagggagtgttctaatt
tcattcttctacgtgtagctgtccagttttcccagcaccactttttgaagggactgtgta
atctcccttgtatagtcttgccttctagttggctgtaggtgcatgggtttaattctgggc
tttctatcctgtcccactgaactgtgtttctgtttttgtgctgttaccacactgtattga
tgactgtagctttgtattatggtctgaagtcagtgcacctgactcctccagatccatttt
tctttctcaggatggctttagctcttctgggtcttctgtgccccaaagcaaactttaaaa
tactttgctctagttctgtgaaaaatgctgttgttaatttgatagggattgcactgaatc
tgtagattggctttggcagtatagtcattttgacaatattgattcttctaacccaagacc
ctggtatatctttccacatgtttgtgtcaactttgatttctttcagcCTATTTAAGAAGG
ATAGGTGTTAGCTCTTCTCTAAATGTTTGATAGAATTTGCCTGTGAACTCTTCCATTGTG
GTCACTGACATGCCCTCCAGACTAAGGAAGACCCACAAACTTTGGGGCCACATGAGCCAA
AGCCATGGCCACATTGGCAAACACTGGAAGCCCTCAGGAGGTCAGGGTAATGCGGGTGCC
ATGCATCACCACAGGATCATCTTTGATAAATACCACCTGGGATATTTTGGGAAAATTGTT
CTGAGGCATTACAACTTGAAGAGGAACCAGAACTTCTGCCCAATTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATTTAGATCTTTAATCCCTTTTTAATTTTTTTTACatggagttagggagtgttctaatt
tcattcttctacgtgtagctgtccagttttcccagcaccactttttgaagggactgtgta
atctcccttgtatagtcttgccttctagttggctgtaggtgcatgggtttaattctgggc
tttctatcctgtcccactgaactgtgtttctgtttttgtgctgttaccacactgtattga
tgactgtagctttgtattatggtctgaagtcagtgcacctgactcctccagatccatttt
tctttctcaggatggctttagctcttctgggtcttctgtgccccaaagcaaactttaaaa
tactttgctctagttctgtgaaaaatgctgttgttaatttgatagggattgcactgaatc
tgtagattggctttggcagtatagtcattttgacaatattgattcttctaacccaagacc
ctggtatatctttccacatgtttgtgtcaactttgatttctttcagcCTATTTAAGAAGG
ATAGGTGTTAGCTCTTCTCTAAATGTTTGATAGAATTTGCCTGTGAACTCTTCCATTGTG
GTCACTGACATGCCCTCCAGACTAAGGAAGACCCACAAACTTTGGGGCCACATGAGCCAA
AGCCATGGCCACATTGGCAAACACTGGAAGCCCTCAGGAGGTCAGGGTAATGCGGGTGCC
ATGCATCACCACAGGATCATCTTTGATAAATACCACCTGGGATATTTTGGGAAAATTGTT
CTGAGGCATTACAACTTGAAGAGGAACCAGAACTTCTGCCCAATTG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q9BQQ5_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9BQQ5_HUMAN

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-184, + strand, RNAz p=0.988865

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-184, + strand, RNAz p=0.988865

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               1-248, gnl|bosTau2|chr10 (42214138-42213875)
               


               
               641-826, gnl|bosTau2|chr14 (45287162-45287345)
               

               
               641-826, gnl|Hg17|chr6 (153695951-153695766)
               

               
               641-826, gnl|Mm7|chr3 (24147429-24147611)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-248, gnl|bosTau2|chr10 (42214138-42213875)
               


               
               641-826, gnl|bosTau2|chr14 (45287162-45287345)
               

               
               641-826, gnl|Hg17|chr6 (153695951-153695766)
               

               
               641-826, gnl|Mm7|chr3 (24147429-24147611)

	1-248, gnl\|bosTau2\|chr10 (42214138-42213875)

	641-826, gnl\|bosTau2\|chr14 (45287162-45287345)
	641-826, gnl\|Hg17\|chr6 (153695951-153695766)
	641-826, gnl\|Mm7\|chr3 (24147429-24147611)