Lng1-LNG010035E02
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATTCATCTTTGACAGTGCCAATGTGCCAGTCCCTCCTGGAATATATAACATCTACAGTC ACCAGCAGATAATAGAACAAGTGAGTCAGCTGGTTATCGATCACCTGAAAATCCAACGCT GGCTCTTTAAAATGGACTATGAGTTTGGAGGAAATGGGACTGCATTTTGTGACATCCCTT CCCACCTAAAGTGCTACAAGTGGGTCCTAAAGGGGAGTCACAGATATGGCCACGAAGACT GGAGCAAGAAATGGGCACAAGAGCCAGCTTTGGTGAAGATCTCCGAGGAGCTGGCGGGCA TTTTAGCACAGCACGCACAGCCAGTCAATGAGAAACGGTTCTCGACATGGAGGAAATTCC TCCAAACATTTCTCAGTCAAGGAGGCGTGATTGAAGCATACCCACCTACAGAGAGTGTCA CCAATGTGACAGTGGACATGCTGATAGAGCCCAATGGAGAAATCAGGCTGCTGTCAACAG GGGACCAGTTTCATGCCGAAGGCCCCTTCATCTCCTCTGGAACCACCATGCCTCAGGCCT CAGTAGATCCCCAAGTTCTCAGTTCTTTGTGCCTTCAAATTGGAAAAGCCTGTAAAATGA AAAATGTGGTTGGTTACTTCTCCATAGACCTGGTGACTTTTATTGATCCAAGCACCATGG AGCAGCAGGTGTGGGCAACAGGCCTCAACATCTCATACAGTGACCAACTGGCCCTGACCC AGCTCACCTTATACCTGACCAACGGCCACCTGGATTGCAGTTTGGGCACCCCTTGAAGTG CCCTGCTTTGTTCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATTCATCTTTGACAGTGCCAATGTGCCAGTCCCTCCTGGAATATATAACATCTACAGTC ACCAGCAGATAATAGAACAAGTGAGTCAGCTGGTTATCGATCACCTGAAAATCCAACGCT GGCTCTTTAAAATGGACTATGAGTTTGGAGGAAATGGGACTGCATTTTGTGACATCCCTT CCCACCTAAAGTGCTACAAGTGGGTCCTAAAGGGGAGTCACAGATATGGCCACGAAGACT GGAGCAAGAAATGGGCACAAGAGCCAGCTTTGGTGAAGATCTCCGAGGAGCTGGCGGGCA TTTTAGCACAGCACGCACAGCCAGTCAATGAGAAACGGTTCTCGACATGGAGGAAATTCC TCCAAACATTTCTCAGTCAAGGAGGCGTGATTGAAGCATACCCACCTACAGAGAGTGTCA CCAATGTGACAGTGGACATGCTGATAGAGCCCAATGGAGAAATCAGGCTGCTGTCAACAG GGGACCAGTTTCATGCCGAAGGCCCCTTCATCTCCTCTGGAACCACCATGCCTCAGGCCT CAGTAGATCCCCAAGTTCTCAGTTCTTTGTGCCTTCAAATTGGAAAAGCCTGTAAAATGA AAAATGTGGTTGGTTACTTCTCCATAGACCTGGTGACTTTTATTGATCCAAGCACCATGG AGCAGCAGGTGTGGGCAACAGGCCTCAACATCTCATACAGTGACCAACTGGCCCTGACCC AGCTCACCTTATACCTGACCAACGGCCACCTGGATTGCAGTTTGGGCACCCCTTGAAGTG CCCTGCTTTGTTCCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 380-498, + strand, RNAz p=0.532517 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 380-498, + strand, RNAz p=0.532517 |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 66-261, gnl|bosTau2|chr10 (6083031-6082836) | |
| 66-261, gnl|canFam2|chr30 (34542728-34542911) | |
| 66-261, gnl|danRer3|chr18 (23976452-23976629) | |
| 66-261, gnl|echTel1|scaffold_319037 (63732-63549) | |
| 66-261, gnl|galGal2|chr10 (19587059-19587242) | |
| 66-261, gnl|hg17|chr15 (65479490-65479673) | |
| 66-261, gnl|Hg17|chr15 (65479503-65479698) | |
| 66-261, gnl|loxAfr1|scaffold_2002 (31079-31262) | |
| 66-261, gnl|mm7|chr9 (63524607-63524425) | |
| 66-261, gnl|Mm7|chr9 (63524593-63524398) | |
| 66-261, gnl|monDom2|scaffold_12 (44864406-44864235) | |
| 66-261, gnl|oryCun1|scaffold_205037 (50217-50400) | |
| 66-261, gnl|panTro1|chr16_random (18235081-18235264) | |
| 66-261, gnl|rheMac2|chr7 (45991499-45991682) | |
| 66-261, gnl|rn3|chr8 (67677930-67677749) | |
| 66-261, gnl|xenTro1|scaffold_5 (92230-92413) | |
| 380-671, gnl|bosTau2|chr10 (6061193-6060902) | |
| 380-671, gnl|canFam2|chr30 (34562931-34563251) | |
| 380-671, gnl|danRer3|chr18 (23991833-23992126) | |
| 380-671, gnl|dasNov1|scaffold_1359 (11146-10823) | |
| 380-671, gnl|echTel1|scaffold_319037 (35880-35567) | |
| 380-671, gnl|galGal2|chr10 (19599638-19599953) | |
| 380-671, gnl|hg17|chr15 (65500678-65501003) | |
| 380-671, gnl|Hg17|chr15 (65500681-65500972) | |
| 380-671, gnl|mm7|chr9 (63509156-63508831) | |
| 380-671, gnl|Mm7|chr9 (63509151-63508860) | |
| 380-671, gnl|monDom2|scaffold_12 (44821044-44820720) | |
| 380-671, gnl|oryCun1|scaffold_205037 (74019-74332) | |
| 380-671, gnl|panTro1|chr16 (66007609-66007934) | |
| 380-671, gnl|rheMac2|chr7 (46013867-46014192) | |
| 380-671, gnl|rn3|chr8 (67660899-67660574) | |
| 380-671, gnl|xenTro1|scaffold_5 (99939-100257) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 66-261, gnl|bosTau2|chr10 (6083031-6082836) | |
| 66-261, gnl|canFam2|chr30 (34542728-34542911) | |
| 66-261, gnl|danRer3|chr18 (23976452-23976629) | |
| 66-261, gnl|echTel1|scaffold_319037 (63732-63549) | |
| 66-261, gnl|galGal2|chr10 (19587059-19587242) | |
| 66-261, gnl|hg17|chr15 (65479490-65479673) | |
| 66-261, gnl|Hg17|chr15 (65479503-65479698) | |
| 66-261, gnl|loxAfr1|scaffold_2002 (31079-31262) | |
| 66-261, gnl|mm7|chr9 (63524607-63524425) | |
| 66-261, gnl|Mm7|chr9 (63524593-63524398) | |
| 66-261, gnl|monDom2|scaffold_12 (44864406-44864235) | |
| 66-261, gnl|oryCun1|scaffold_205037 (50217-50400) | |
| 66-261, gnl|panTro1|chr16_random (18235081-18235264) | |
| 66-261, gnl|rheMac2|chr7 (45991499-45991682) | |
| 66-261, gnl|rn3|chr8 (67677930-67677749) | |
| 66-261, gnl|xenTro1|scaffold_5 (92230-92413) | |
| 380-671, gnl|bosTau2|chr10 (6061193-6060902) | |
| 380-671, gnl|canFam2|chr30 (34562931-34563251) | |
| 380-671, gnl|danRer3|chr18 (23991833-23992126) | |
| 380-671, gnl|dasNov1|scaffold_1359 (11146-10823) | |
| 380-671, gnl|echTel1|scaffold_319037 (35880-35567) | |
| 380-671, gnl|galGal2|chr10 (19599638-19599953) | |
| 380-671, gnl|hg17|chr15 (65500678-65501003) | |
| 380-671, gnl|Hg17|chr15 (65500681-65500972) | |
| 380-671, gnl|mm7|chr9 (63509156-63508831) | |
| 380-671, gnl|Mm7|chr9 (63509151-63508860) | |
| 380-671, gnl|monDom2|scaffold_12 (44821044-44820720) | |
| 380-671, gnl|oryCun1|scaffold_205037 (74019-74332) | |
| 380-671, gnl|panTro1|chr16 (66007609-66007934) | |
| 380-671, gnl|rheMac2|chr7 (46013867-46014192) | |
| 380-671, gnl|rn3|chr8 (67660899-67660574) | |
| 380-671, gnl|xenTro1|scaffold_5 (99939-100257) |