Lng1-LNG010036D11
|
ATCATGATTCTAGACAGCTCCAGCCTTTGCTCATTTGATAGCCAATAAATATTTGTTGAG
AGACCCTAATCCGGGCTCAGGATACAGCAGAAAACAAGAAGTCTCGAGCTTCATGAAGCG
TAGAGTGCCCAGTGTTTTGGACTTAAGGTCTCAGTCTCTGAAGTCAGGATCCAGGTCTTC
ATAGTTGTGAAGGCAATGCCTGTGGTCCTCAGTCTTTAACCTCTAATTTATACTTTCGGG
TTCTCAAGGACTCTGCTACCGGACTCAGCATAGATTGGCAGTGACATGTTCTTCCCCTGC
CATCCTTAGCTGAGCAGGGCCACCCCGCCAGTCCAGCAGTGCCTCAAGCAGATTAATACC
TGCTGCGTCAGCAGAGCAGAAAGAAGAAAGTATAAACAAAAGGCACTTAATTTGGTGTGT
TTTTTGATTCTCCTCAGGCCACTTGGCAGCAAGCACCTGGGCTCAGGGCCGAGCACTGAT
AAGAGAAATGCGTTTCTTTTGCTTATGTTTTTATAAGGCCAAACACTCCTATAGCTTTCA
CAGTGAGATGTGAGTAAATCTGGGATGGCTGCCTATTCTTTCATTTTGGTGCTGAAATAA
GTGTACCTCTTGTCAAGTTAAAAGAGTTTGATCAAAAATAGGTCAACGCTAAGATCCCAA
GCAAAAAAAACATCACTTAAGCTTTAAGAGGTTTGCTGAGTGCTTTTTGACTAGTTTGTT
TTGATGTTGGTGTTTTTAAATTTTTTTCCTTATTGCTGATTGACCAATGAGGAAGTCAAA
ATTATCTGAATTCTTCTTGTCTTTTCCTTATAAGTTTAAATAC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATCATGATTCTAGACAGCTCCAGCCTTTGCTCATTTGATAGCCAATAAATATTTGTTGAG
AGACCCTAATCCGGGCTCAGGATACAGCAGAAAACAAGAAGTCTCGAGCTTCATGAAGCG
TAGAGTGCCCAGTGTTTTGGACTTAAGGTCTCAGTCTCTGAAGTCAGGATCCAGGTCTTC
ATAGTTGTGAAGGCAATGCCTGTGGTCCTCAGTCTTTAACCTCTAATTTATACTTTCGGG
TTCTCAAGGACTCTGCTACCGGACTCAGCATAGATTGGCAGTGACATGTTCTTCCCCTGC
CATCCTTAGCTGAGCAGGGCCACCCCGCCAGTCCAGCAGTGCCTCAAGCAGATTAATACC
TGCTGCGTCAGCAGAGCAGAAAGAAGAAAGTATAAACAAAAGGCACTTAATTTGGTGTGT
TTTTTGATTCTCCTCAGGCCACTTGGCAGCAAGCACCTGGGCTCAGGGCCGAGCACTGAT
AAGAGAAATGCGTTTCTTTTGCTTATGTTTTTATAAGGCCAAACACTCCTATAGCTTTCA
CAGTGAGATGTGAGTAAATCTGGGATGGCTGCCTATTCTTTCATTTTGGTGCTGAAATAA
GTGTACCTCTTGTCAAGTTAAAAGAGTTTGATCAAAAATAGGTCAACGCTAAGATCCCAA
GCAAAAAAAACATCACTTAAGCTTTAAGAGGTTTGCTGAGTGCTTTTTGACTAGTTTGTT
TTGATGTTGGTGTTTTTAAATTTTTTTCCTTATTGCTGATTGACCAATGAGGAAGTCAAA
ATTATCTGAATTCTTCTTGTCTTTTCCTTATAAGTTTAAATAC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
320-460, - strand, RNAmicro p=0.999131 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
320-460, - strand, RNAmicro p=0.999131 |
|
1-265, gnl|bosTau2|chr17 (4464410-4464679) |
|
1-265, gnl|Hg17|chr4 (152500779-152500474) |
| |
|
276-723, gnl|bosTau2|chr17 (4464927-4465390) |
|
276-723, gnl|canFam2|chr15 (52174989-52175622) |
|
276-723, gnl|dasNov1|scaffold_16856 (19141-18497) |
|
276-723, gnl|echTel1|scaffold_312415 (29251-28619) |
|
276-723, gnl|hg17|chr4 (152499695-152500298) |
|
276-723, gnl|Hg17|chr4 (152500205-152499771) |
|
276-723, gnl|oryCun1|scaffold_137368 (12688-13327) |
|
276-723, gnl|panTro1|chr3 (169812613-169813216) |
|
276-723, gnl|rheMac2|chr5 (143462523-143463127) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-265, gnl|bosTau2|chr17 (4464410-4464679) |
|
1-265, gnl|Hg17|chr4 (152500779-152500474) |
| |
|
276-723, gnl|bosTau2|chr17 (4464927-4465390) |
|
276-723, gnl|canFam2|chr15 (52174989-52175622) |
|
276-723, gnl|dasNov1|scaffold_16856 (19141-18497) |
|
276-723, gnl|echTel1|scaffold_312415 (29251-28619) |
|
276-723, gnl|hg17|chr4 (152499695-152500298) |
|
276-723, gnl|Hg17|chr4 (152500205-152499771) |
|
276-723, gnl|oryCun1|scaffold_137368 (12688-13327) |
|
276-723, gnl|panTro1|chr3 (169812613-169813216) |
|
276-723, gnl|rheMac2|chr5 (143462523-143463127) |
