Non-Coding RNA Search

Lng1-LNG010041C08

Sequence:


               
               TATATTAAGTATTCACAATCAGTGTATTACCACCAATGTCTGACCAGTATTGTCAAATAG
TACTAGTAGTGATTTAATTTATGCTATTAATTTCAGCACCTAGAGAGCAGGTAAGTACAG
TTTTTCTGGGGGCATATTAATGACATGAGAATTTCTAACAAGGGAAAAGATAATTACTGA
GAAAGGAGTATATCATTGGCGGATACATACATGAACAGTTCTCTCTTCTCAATAGTGAAG
CATGGTAATTGTTTCGTATTTGCTAATTTAGATTACATAGTGATCCACAGGTAAAATCCT
GCAGATAAAATACTGCGTTTACTTTTAAACCTTTTATGTTACTATTTAATTAAACAATGC
ACATATTAAGGTACCACCCTGCAGCATCTCATAAATGTAGACAGTCTATTTATCCATGCA
TTCATGCATTTATCAAGTGTATATTAATCACCTAACATGTGCGAAGCATCCAGCCATTTT
CTGTTTAGATTCTCTCTGCAGTTGCAAGTTTTATCTGTGCCTCCATACTTCCTACCTGGT
CTATCATTAGTAATTATTTAACAGGTTTATGTAACAATTCCTTTGTGATTGGAGCACTGG
AAGTACATGGAGACTTGGAAAAAAATCGTGACACAAGTACACTGAAGTTTACATAAAGAT
GATTTCTCTTTCTGGTAGACGAAAGAACGTTTAAACTGAAGTTACATCACTTGACTTACA
ATTACCACGACATCCGAAGGAAAGAAGCTGTGAATTGAACCTGAGGACAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATATTAAGTATTCACAATCAGTGTATTACCACCAATGTCTGACCAGTATTGTCAAATAG
TACTAGTAGTGATTTAATTTATGCTATTAATTTCAGCACCTAGAGAGCAGGTAAGTACAG
TTTTTCTGGGGGCATATTAATGACATGAGAATTTCTAACAAGGGAAAAGATAATTACTGA
GAAAGGAGTATATCATTGGCGGATACATACATGAACAGTTCTCTCTTCTCAATAGTGAAG
CATGGTAATTGTTTCGTATTTGCTAATTTAGATTACATAGTGATCCACAGGTAAAATCCT
GCAGATAAAATACTGCGTTTACTTTTAAACCTTTTATGTTACTATTTAATTAAACAATGC
ACATATTAAGGTACCACCCTGCAGCATCTCATAAATGTAGACAGTCTATTTATCCATGCA
TTCATGCATTTATCAAGTGTATATTAATCACCTAACATGTGCGAAGCATCCAGCCATTTT
CTGTTTAGATTCTCTCTGCAGTTGCAAGTTTTATCTGTGCCTCCATACTTCCTACCTGGT
CTATCATTAGTAATTATTTAACAGGTTTATGTAACAATTCCTTTGTGATTGGAGCACTGG
AAGTACATGGAGACTTGGAAAAAAATCGTGACACAAGTACACTGAAGTTTACATAAAGAT
GATTTCTCTTTCTGGTAGACGAAAGAACGTTTAAACTGAAGTTACATCACTTGACTTACA
ATTACCACGACATCCGAAGGAAAGAAGCTGTGAATTGAACCTGAGGACAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               277-393, - strand, RNAz p=0.912374

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               277-393, - strand, RNAz p=0.912374

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-770, gnl|bosTau2|chr16 (8624837-8625639)
               

               
               1-770, gnl|Hg17|chr1 (212864402-212863636)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-770, gnl|bosTau2|chr16 (8624837-8625639)
               

               
               1-770, gnl|Hg17|chr1 (212864402-212863636)

	1-770, gnl\|bosTau2\|chr16 (8624837-8625639)
	1-770, gnl\|Hg17\|chr1 (212864402-212863636)