Non-Coding RNA Search

Lng1-LNG010046B07

Sequence:


               
               TTGTACTAATTTGCATGGACTTTTTTTTCCTTGGAATGAGAGACTGTACTGGGGACACCT
CTAGTGAGCTACCCTGGGGTGTCCTTTGGGGTTTTCATTATGATGGGGAAACTCCGGGGT
TCCTCCCTGACTCCTCAAAAACTTGATTTTCTATATCTTACAGATGCATTTGCAAACTTT
TTGAACTTGAGGAGGAAAGGAGATAAGGGGGCTGACTTCTTATTTGCCCTTTCAAAATCT
TAAATGGTTTTGCATAGCGTGGCCTTATATAGTGTCAGCTACATCTAACTTCCTGTGATG
TAATTGTTTCCTCACTCGCAAGAGAAGGAATTGGAAAGATTCTTTTTTGTGGTTTTTATT
TGAGGTGTATATATGTGTAACTTTTTACCCCTGCCCATTTTTAACAGCTGAAGCTCTCTT
GGGGGGAGGAGTGGAACAGAAAAGGAGGGCATCCTGCTTTTGGACGTATTTAGCCAAAGA
ATGCTAACCAGTGGTGGTAGCTTTATAGCAGTGACTCCCATTATTGTGCAAGATGGAGTT
TGCCAAAGACATTTATATCTTCCGACTAGTAAGCATCACTTAGCCAAGGCTATAATTAGT
GGCTGTGCACTGTTTATTGTATGTTTGGTTGGTGGGAACCCTTGGGGTTGAGCCAAACAT
CCCGTCCTGCACAGCCAAACAGGGTGCCCAGGGAGGCTGATAGGCCTCTACTAGGATGGG
GGCTAAGTCATCACCGTTAGAATTAGATCCCGAGGAGTGTCCGTCAtggttaatgaacct
gactggtatccatgaggacacggattctatctcttcccttactcagcaggttaaggatct
gacattgccgtgagctgtggtgtaggtcacagatgcggctcggatctggagttgctgtgg
ctgtgg

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGTACTAATTTGCATGGACTTTTTTTTCCTTGGAATGAGAGACTGTACTGGGGACACCT
CTAGTGAGCTACCCTGGGGTGTCCTTTGGGGTTTTCATTATGATGGGGAAACTCCGGGGT
TCCTCCCTGACTCCTCAAAAACTTGATTTTCTATATCTTACAGATGCATTTGCAAACTTT
TTGAACTTGAGGAGGAAAGGAGATAAGGGGGCTGACTTCTTATTTGCCCTTTCAAAATCT
TAAATGGTTTTGCATAGCGTGGCCTTATATAGTGTCAGCTACATCTAACTTCCTGTGATG
TAATTGTTTCCTCACTCGCAAGAGAAGGAATTGGAAAGATTCTTTTTTGTGGTTTTTATT
TGAGGTGTATATATGTGTAACTTTTTACCCCTGCCCATTTTTAACAGCTGAAGCTCTCTT
GGGGGGAGGAGTGGAACAGAAAAGGAGGGCATCCTGCTTTTGGACGTATTTAGCCAAAGA
ATGCTAACCAGTGGTGGTAGCTTTATAGCAGTGACTCCCATTATTGTGCAAGATGGAGTT
TGCCAAAGACATTTATATCTTCCGACTAGTAAGCATCACTTAGCCAAGGCTATAATTAGT
GGCTGTGCACTGTTTATTGTATGTTTGGTTGGTGGGAACCCTTGGGGTTGAGCCAAACAT
CCCGTCCTGCACAGCCAAACAGGGTGCCCAGGGAGGCTGATAGGCCTCTACTAGGATGGG
GGCTAAGTCATCACCGTTAGAATTAGATCCCGAGGAGTGTCCGTCAtggttaatgaacct
gactggtatccatgaggacacggattctatctcttcccttactcagcaggttaaggatct
gacattgccgtgagctgtggtgtaggtcacagatgcggctcggatctggagttgctgtgg
ctgtgg

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               606-754, - strand, RNAz p=0.990367

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               606-754, - strand, RNAz p=0.990367

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-754, gnl|bosTau2|chr26 (19219952-19219187)
               

               
               1-754, gnl|Hg17|chr10 (112258515-112259287)
               

               
               1-754, gnl|Mm7|chr19 (53438717-53439855)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-754, gnl|bosTau2|chr26 (19219952-19219187)
               

               
               1-754, gnl|Hg17|chr10 (112258515-112259287)
               

               
               1-754, gnl|Mm7|chr19 (53438717-53439855)

	1-754, gnl\|bosTau2\|chr26 (19219952-19219187)
	1-754, gnl\|Hg17\|chr10 (112258515-112259287)
	1-754, gnl\|Mm7\|chr19 (53438717-53439855)