Non-Coding RNA Search

Lng1-LNG010047A08

Sequence:


               
               AATTACAAGGTGGCTCCAACTGGTCTTAAGTTTTGGCCTCGGCTGTCTTCCTCACACCCA
GTCCCTGGAATCCTTCTCCATCCTTCTTTCTGCCGTGAGTACCTTTTCTTGTCTCTGTCC
TAGACAGAGCTCCTCTTAACACTCTGCCCTTAGCCGGTGAGGCATGCCAAGGACCCCAAG
AAAAGGCTCTCACAGCAAATGTTTGTAGGCATAAGCAGATCTGAGCCTTCCACTTCAGCA
GCCTTGCAGCTCACTTCTTTTTGTTTTCTGTTCTGATCATTGCCTCTTTTCTGGTTCCAC
CTAGGGGTAGTCTCTGCTTAAGTCTGGTGGGCAGTCTTGGTTGTAGGCAGTCACCCTTGG
TCCTGTTACTTGTCTTCAGCTTTCACATCACAGTAATAAGACAAAGGGCGCCATGCCTGG
GTTGACTTAGAGGACAGAGAAGGGGAAATGAAAGAAACTGGATAATAAAAAAAAAGGAGA
AACTGCCTTACTGGATTTTATAGAAGTCAGGAGGATATATGGTGAAGGTGAGAGCAGTCC
TTTTCTTCTTGTCCCTCCACAAACAGTTTAGTGCTGGTATGAAAGCACTAAAAACCCTCT
GGGCTCTGTGCTGGGAATGCACTAGCCCTAAACCATCTAGATGCCTGGGGTCTGGTCCAG
GAGGACATAGACATACAGGTGAACAGCAGTGCAGGTTGACTTCAGTCTCTCTCCTGCCTT
CCTGTGTGTTCCTCTGCTCATTCTCATTCCTACTTCAGCTCATTCCAGAGGACTTCACAT
CTCCCTCTGTTCCATGCTTTTCTTTCCATTCCCAAAGTCTCTTCTCCCCCTTGTTTTGTT
TCTGTTGTTTCTTGCTGTTTTGTCACTTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTACAAGGTGGCTCCAACTGGTCTTAAGTTTTGGCCTCGGCTGTCTTCCTCACACCCA
GTCCCTGGAATCCTTCTCCATCCTTCTTTCTGCCGTGAGTACCTTTTCTTGTCTCTGTCC
TAGACAGAGCTCCTCTTAACACTCTGCCCTTAGCCGGTGAGGCATGCCAAGGACCCCAAG
AAAAGGCTCTCACAGCAAATGTTTGTAGGCATAAGCAGATCTGAGCCTTCCACTTCAGCA
GCCTTGCAGCTCACTTCTTTTTGTTTTCTGTTCTGATCATTGCCTCTTTTCTGGTTCCAC
CTAGGGGTAGTCTCTGCTTAAGTCTGGTGGGCAGTCTTGGTTGTAGGCAGTCACCCTTGG
TCCTGTTACTTGTCTTCAGCTTTCACATCACAGTAATAAGACAAAGGGCGCCATGCCTGG
GTTGACTTAGAGGACAGAGAAGGGGAAATGAAAGAAACTGGATAATAAAAAAAAAGGAGA
AACTGCCTTACTGGATTTTATAGAAGTCAGGAGGATATATGGTGAAGGTGAGAGCAGTCC
TTTTCTTCTTGTCCCTCCACAAACAGTTTAGTGCTGGTATGAAAGCACTAAAAACCCTCT
GGGCTCTGTGCTGGGAATGCACTAGCCCTAAACCATCTAGATGCCTGGGGTCTGGTCCAG
GAGGACATAGACATACAGGTGAACAGCAGTGCAGGTTGACTTCAGTCTCTCTCCTGCCTT
CCTGTGTGTTCCTCTGCTCATTCTCATTCCTACTTCAGCTCATTCCAGAGGACTTCACAT
CTCCCTCTGTTCCATGCTTTTCTTTCCATTCCCAAAGTCTCTTCTCCCCCTTGTTTTGTT
TCTGTTGTTTCTTGCTGTTTTGTCACTTTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               82-201, - strand, RNAz p=0.996718

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               82-201, - strand, RNAz p=0.996718

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               15-853, gnl|bosTau2|chr3 (5125666-5124815)
               

               
               15-853, gnl|Hg17|chr1 (154933105-154933944)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-853, gnl|bosTau2|chr3 (5125666-5124815)
               

               
               15-853, gnl|Hg17|chr1 (154933105-154933944)

	15-853, gnl\|bosTau2\|chr3 (5125666-5124815)
	15-853, gnl\|Hg17\|chr1 (154933105-154933944)