Non-Coding RNA Search

Lng1-LNG010061H01

Sequence:


               
               CAGCCTCTCACCTTCATCTGAACTCTGTTGTTAAGGCATGTAAGCATTACCTAACGACAA
GGACGCTGCCCATGTCCCCCCCGAGTGAGCGCGTTCAGCAGCAGAGTGCCCGCATGCAGC
GCTCCTTTATGCTGCAGCAGCTGGGCCTGAGCATCGTGAGCTCAGTCCTCAATTCCAGCC
AGAGTGGCGAGGAGCAGCCGGCCCCCATGAGCTCCTCAATGCTCAGTAACCTGGACCAGC
AGACACCCTTCCCCATGAGACGCTTGCATAAGCGCAAGCAGTCTGCAGAGGAGCGGGCCC
GGCAGCGCCTCCCACCCGCCCTGGATGAGTCTGCCATCTCCGACGTGACGCCAGAGAATG
GGCCGTCGGGGGTTCATTCCCGGGAGGAGTTCTTTTCACCAGACTCTCTGAAGATCGTGG
ATAACCCTAAGGCCAACGGGATGGCCGACAACCAGGATGACAGTGCCATGATGTTTGAGC
AGTCTTTCGGTGCTCAGGAAGAGGCCCAGGTGCCCAGCCAGTCGGACAACAGTGCCGGCA
ACATGGCCCAGCTGTCCATGGCCTCCCGAGCCACTCAGGTCAAGACTAGTTTTGAGCAGG
AAGCTGCGACTGAGAAAAGTGGTTTTCAGTGTGAAAACCCTGAGGTTGGCCTTGGCGAGA
AGGAGCACATGAGAGTGGTGGTTAAATCTGAGTCCCTGAGCTCTCCCGAGCCTCAGGATG
AAGTGAGTGACGTGACCTCCCAGGCGGAAGGCAGTGAATCANTGGAAGTGGAGGGAGTGG
TGGTCAGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCCTCTCACCTTCATCTGAACTCTGTTGTTAAGGCATGTAAGCATTACCTAACGACAA
GGACGCTGCCCATGTCCCCCCCGAGTGAGCGCGTTCAGCAGCAGAGTGCCCGCATGCAGC
GCTCCTTTATGCTGCAGCAGCTGGGCCTGAGCATCGTGAGCTCAGTCCTCAATTCCAGCC
AGAGTGGCGAGGAGCAGCCGGCCCCCATGAGCTCCTCAATGCTCAGTAACCTGGACCAGC
AGACACCCTTCCCCATGAGACGCTTGCATAAGCGCAAGCAGTCTGCAGAGGAGCGGGCCC
GGCAGCGCCTCCCACCCGCCCTGGATGAGTCTGCCATCTCCGACGTGACGCCAGAGAATG
GGCCGTCGGGGGTTCATTCCCGGGAGGAGTTCTTTTCACCAGACTCTCTGAAGATCGTGG
ATAACCCTAAGGCCAACGGGATGGCCGACAACCAGGATGACAGTGCCATGATGTTTGAGC
AGTCTTTCGGTGCTCAGGAAGAGGCCCAGGTGCCCAGCCAGTCGGACAACAGTGCCGGCA
ACATGGCCCAGCTGTCCATGGCCTCCCGAGCCACTCAGGTCAAGACTAGTTTTGAGCAGG
AAGCTGCGACTGAGAAAAGTGGTTTTCAGTGTGAAAACCCTGAGGTTGGCCTTGGCGAGA
AGGAGCACATGAGAGTGGTGGTTAAATCTGAGTCCCTGAGCTCTCCCGAGCCTCAGGATG
AAGTGAGTGACGTGACCTCCCAGGCGGAAGGCAGTGAATCANTGGAAGTGGAGGGAGTGG
TGGTCAGTG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61865688|ref|XP_597113.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61865688|ref|XP_597113.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               560-719, + strand, RNAz p=0.925299

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               560-719, + strand, RNAz p=0.925299

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               481-789, gnl|bosTau2|chr15 (44674687-44674983)
               

               
               481-789, gnl|Hg17|chr9 (37431762-37431456)
               

               
               481-789, gnl|Mm7|chr4 (45008412-45008119)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               481-789, gnl|bosTau2|chr15 (44674687-44674983)
               

               
               481-789, gnl|Hg17|chr9 (37431762-37431456)
               

               
               481-789, gnl|Mm7|chr4 (45008412-45008119)

	481-789, gnl\|bosTau2\|chr15 (44674687-44674983)
	481-789, gnl\|Hg17\|chr9 (37431762-37431456)
	481-789, gnl\|Mm7\|chr4 (45008412-45008119)