Lng1-LNG010066G04
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGATTCCCCCTGCCCGGGAGATGGCTGGCCAAAGAGGCTGGGCCCCGCCATGGGCCAGA TGGCAGACGACCTTGGCTGGCGGCTCAGCCTTTTGCTGCTTTCCTTGCTCCTGGCTCGAG CTGGTGTCTGGGGATTCCCGAGGCCCCCAGGGAGGCCCCCCCTGAGCCTGCAGGAGTTGC AGAGGGAGTTCAAGGTCAGCCTGCATCTCGCCAGGAAGCTGCTGTCTGAGGTTCGGGTCC AGGCCCGCCACTTTGCTGAATCACACCTGCCAGGCGTGAACCTGGACCTGCTGCCCCTAG GAGAGCAGCTTCCCAACGTTTCCCTGAACTTCCAGGCTTGGCGTGGCCTCTCTGACCCAG AACGACTCTGCTTCCTCTCCATGACACTTCGCCCCTTCCATACCCTGTTGGGGGGGCTGG GGAGCCAGGGGTTCTGGACCAGTTCAGAGAGGATGCAGCTGTGGGCCATAAGGCTGGATC TCCGAGATTTGCAACAGCATCTCCGCTTCCAGGTGCTGGCTGCTGGATTCAACCTACCTG GTCAGGAGGAGGAGGAGAACGAGGCAGGGAGGGAGCTGCTCCCAGGGGCTCCGGGTGGTC CCTCGAAGCCGGCAGCGCAGGTGTCCTGGCCGAGGCTCCTCTACACTTACCAGTTGCTAC ACTCCTTGGAACTTGTCTTGTCTCGGGCCATGAGGGACTTTCTGCTGCTCTCCCGGGCCG GGAACCCAGCCCCGGCCTTGGGGTTCCCAACACCCAGCTCCCCACCCTGATGGAATGACG TCTCAGCACCTTCCCTCCACCCACGCGAGGACTGGAGTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGATTCCCCCTGCCCGGGAGATGGCTGGCCAAAGAGGCTGGGCCCCGCCATGGGCCAGA TGGCAGACGACCTTGGCTGGCGGCTCAGCCTTTTGCTGCTTTCCTTGCTCCTGGCTCGAG CTGGTGTCTGGGGATTCCCGAGGCCCCCAGGGAGGCCCCCCCTGAGCCTGCAGGAGTTGC AGAGGGAGTTCAAGGTCAGCCTGCATCTCGCCAGGAAGCTGCTGTCTGAGGTTCGGGTCC AGGCCCGCCACTTTGCTGAATCACACCTGCCAGGCGTGAACCTGGACCTGCTGCCCCTAG GAGAGCAGCTTCCCAACGTTTCCCTGAACTTCCAGGCTTGGCGTGGCCTCTCTGACCCAG AACGACTCTGCTTCCTCTCCATGACACTTCGCCCCTTCCATACCCTGTTGGGGGGGCTGG GGAGCCAGGGGTTCTGGACCAGTTCAGAGAGGATGCAGCTGTGGGCCATAAGGCTGGATC TCCGAGATTTGCAACAGCATCTCCGCTTCCAGGTGCTGGCTGCTGGATTCAACCTACCTG GTCAGGAGGAGGAGGAGAACGAGGCAGGGAGGGAGCTGCTCCCAGGGGCTCCGGGTGGTC CCTCGAAGCCGGCAGCGCAGGTGTCCTGGCCGAGGCTCCTCTACACTTACCAGTTGCTAC ACTCCTTGGAACTTGTCTTGTCTCGGGCCATGAGGGACTTTCTGCTGCTCTCCCGGGCCG GGAACCCAGCCCCGGCCTTGGGGTTCCCAACACCCAGCTCCCCACCCTGATGGAATGACG TCTCAGCACCTTCCCTCCACCCACGCGAGGACTGGAGTCT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 82-820, - strand, RNAz p=0.989574 | |
| 541-642, - strand, RNAz p=0.987941 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 82-820, - strand, RNAz p=0.989574 | |
| 541-642, - strand, RNAz p=0.987941 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 82-255, gnl|bosTau2|chr25 (25013329-25013156) | |
| 82-255, gnl|canFam2|chr6 (21258685-21258494) | |
| 82-255, gnl|dasNov1|scaffold_221257 (1336-1144) | |
| 82-255, gnl|hg17|chr16 (28422694-28422886) | |
| 82-255, gnl|Hg17|chr16 (28422872-28422699) | |
| 82-255, gnl|mm7|chr7 (122689323-122689503) | |
| 82-255, gnl|Mm7|chr7 (122689489-122689328) | |
| 82-255, gnl|monDom2|scaffold_5 (119506723-119506915) | |
| 82-255, gnl|oryCun1|scaffold_188144 (12920-12740) | |
| 82-255, gnl|panTro1|chr18 (29238949-29238752) | |
| 82-255, gnl|rn3|chr1 (185883578-185883758) | |
| 82-255, gnl|xenTro1|scaffold_149 (114818-115040) | |
| 501-820, gnl|bosTau2|chr25 (25010890-25010579) | |
| 501-820, gnl|canFam2|chr6 (21260697-21260347) | |
| 501-820, gnl|dasNov1|scaffold_221257 (4113-3801) | |
| 501-820, gnl|hg17|chr16 (28418277-28418619) | |
| 501-820, gnl|Hg17|chr16 (28418754-28418417) | |
| 501-820, gnl|mm7|chr7 (122685643-122685978) | |
| 501-820, gnl|Mm7|chr7 (122686119-122685779) | |
| 501-820, gnl|monDom2|scaffold_5 (119505288-119505726) | |
| 501-820, gnl|oryCun1|scaffold_188144 (16370-16035) | |
| 501-820, gnl|panTro1|chr18_random (14827402-14827060) | |
| 501-820, gnl|rheMac2|chr20 (27127368-27127711) | |
| 501-820, gnl|rn3|chr1 (185880086-185880400) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 82-255, gnl|bosTau2|chr25 (25013329-25013156) | |
| 82-255, gnl|canFam2|chr6 (21258685-21258494) | |
| 82-255, gnl|dasNov1|scaffold_221257 (1336-1144) | |
| 82-255, gnl|hg17|chr16 (28422694-28422886) | |
| 82-255, gnl|Hg17|chr16 (28422872-28422699) | |
| 82-255, gnl|mm7|chr7 (122689323-122689503) | |
| 82-255, gnl|Mm7|chr7 (122689489-122689328) | |
| 82-255, gnl|monDom2|scaffold_5 (119506723-119506915) | |
| 82-255, gnl|oryCun1|scaffold_188144 (12920-12740) | |
| 82-255, gnl|panTro1|chr18 (29238949-29238752) | |
| 82-255, gnl|rn3|chr1 (185883578-185883758) | |
| 82-255, gnl|xenTro1|scaffold_149 (114818-115040) | |
| 501-820, gnl|bosTau2|chr25 (25010890-25010579) | |
| 501-820, gnl|canFam2|chr6 (21260697-21260347) | |
| 501-820, gnl|dasNov1|scaffold_221257 (4113-3801) | |
| 501-820, gnl|hg17|chr16 (28418277-28418619) | |
| 501-820, gnl|Hg17|chr16 (28418754-28418417) | |
| 501-820, gnl|mm7|chr7 (122685643-122685978) | |
| 501-820, gnl|Mm7|chr7 (122686119-122685779) | |
| 501-820, gnl|monDom2|scaffold_5 (119505288-119505726) | |
| 501-820, gnl|oryCun1|scaffold_188144 (16370-16035) | |
| 501-820, gnl|panTro1|chr18_random (14827402-14827060) | |
| 501-820, gnl|rheMac2|chr20 (27127368-27127711) | |
| 501-820, gnl|rn3|chr1 (185880086-185880400) |