Non-Coding RNA Search

Lng1-LNG010067H05

Sequence:


               
               AAAGTTAGGACTGGGAATTGTTGCATGGAGAAAAGTTGCCTTTCTTGTGTAAAAGCTACT
GTTTTAACATGGTGGGATGAAAGCATTGTTTGATTGGGTATACTATGTTAATACATTTAT
ATAGATGACTCTTATTATTAAAACCTAGTGCATTCACTGGAGACCATATCTAAAAAATTA
GAACATAATTTGATCAGGTAGCAGTCTTCCCCAAGATGCTCCAAGTATGACTAATCAGCA
GCTCAGATGATCCATTCTTCTGGTCATAAGTTAATCCTATTAAAATGATGATTTCAAGGA
GAGAAAGCTCAAAGGGAAAAATTAATGTACGTGGTCCCACAGTCACATAGATGACAATAG
GCATCTCAGTTAGGTTTCTCGGCTCAGTCCATGTTGCTTTGCCAAGCTCACTGGAGTTAA
AACCTGTATTCATACACACCAGAATTGTTAGTCTCTTCGATAATCAGACAGGACTTAATT
TTTTATGGTCTCAATAAAACACTCAAGTAATTATATAGTTCTATTCATACATAGCCAGTT
TCCAAATGGCAGGATGTATCACAAAGTGAGTAACAGTGATTCTGGAAAAAGCAGACTGCT
TGCCTCATCTCAGCATGAAGATCCTGGAGAATTATATGTCTCAGAGATCAGCCTCCCTCA
GGCACCCGTGGGTCAGTTTCGAATGGGACTGATCTTGCCTCAGTTCACCCACCTTCCCTG
GACTTGCTCTGCACCTGAGGGTGTCGACTTATTCATACTGATTTCATCCTGATTCAGAGC
TCTGTACTTGTTCTACAAAGATTTCCTCCTTCTTTTCTCTCTTCCCCCCATGTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGTTAGGACTGGGAATTGTTGCATGGAGAAAAGTTGCCTTTCTTGTGTAAAAGCTACT
GTTTTAACATGGTGGGATGAAAGCATTGTTTGATTGGGTATACTATGTTAATACATTTAT
ATAGATGACTCTTATTATTAAAACCTAGTGCATTCACTGGAGACCATATCTAAAAAATTA
GAACATAATTTGATCAGGTAGCAGTCTTCCCCAAGATGCTCCAAGTATGACTAATCAGCA
GCTCAGATGATCCATTCTTCTGGTCATAAGTTAATCCTATTAAAATGATGATTTCAAGGA
GAGAAAGCTCAAAGGGAAAAATTAATGTACGTGGTCCCACAGTCACATAGATGACAATAG
GCATCTCAGTTAGGTTTCTCGGCTCAGTCCATGTTGCTTTGCCAAGCTCACTGGAGTTAA
AACCTGTATTCATACACACCAGAATTGTTAGTCTCTTCGATAATCAGACAGGACTTAATT
TTTTATGGTCTCAATAAAACACTCAAGTAATTATATAGTTCTATTCATACATAGCCAGTT
TCCAAATGGCAGGATGTATCACAAAGTGAGTAACAGTGATTCTGGAAAAAGCAGACTGCT
TGCCTCATCTCAGCATGAAGATCCTGGAGAATTATATGTCTCAGAGATCAGCCTCCCTCA
GGCACCCGTGGGTCAGTTTCGAATGGGACTGATCTTGCCTCAGTTCACCCACCTTCCCTG
GACTTGCTCTGCACCTGAGGGTGTCGACTTATTCATACTGATTTCATCCTGATTCAGAGC
TCTGTACTTGTTCTACAAAGATTTCCTCCTTCTTTTCTCTCTTCCCCCCATGTCCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               85-198, - strand, RNAz p=0.876175

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               85-198, - strand, RNAz p=0.876175

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               5-828, gnl|bosTau2|chr2 (15517700-15516891)
               

               
               5-828, gnl|Hg17|chr2 (173775966-173777098)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-828, gnl|bosTau2|chr2 (15517700-15516891)
               

               
               5-828, gnl|Hg17|chr2 (173775966-173777098)

	5-828, gnl\|bosTau2\|chr2 (15517700-15516891)
	5-828, gnl\|Hg17\|chr2 (173775966-173777098)