Non-Coding RNA Search

Lng1-LNG010068B04

Sequence:


               
               ATCTGAGATGCCACCTACCCCTACCCTGGCAGTCCAGTCCCACACCCCCACTTTATTTTT
TCACCAGTGCTTACCGCTAATTTATATCCTCAGAGCCACAGAGTAGGTCCTTGATAAATA
TAAAAAAAACAGTGCATCTGTACTAGTGACAGCTGTACGCTAGTGAGATACAATCCCATT
TGCTCAGCATTTCCTTGTTTGCTGCCTTTTGCAAGAATTAGAAATACATTAATAGATTAA
TTCCTAAAAAGAGGGTGGCTAATGGTAGCAAGGAATATGCTTAAGAGGGGATGACGTATG
TAATTCTTTATGAGAATGCTAAGATAAGGAAATGGAAAAATTCTAAATTCTGCCCAAGAC
TTTGTGGGTACTGCTCCCATCATTCACTTCTCCACAAAATGAGATCGTGCACCCTTCCCT
AAAACAGAAGCAAATATATATCTGTGTCTTCCTACTGTCATTTGAAGGGTAATGCTTCAG
AGTCATCATCAAGAACAGAGGACAAAGTGCATTTCGTTTGTGGCTGGGCTTCCTTTTCAG
TGATGCTTCTCAAAGGAAGGCTGAAGAACTAAAAAGAGGCCCATGCCCTTCCACTTGTCA
GGGAAGGACGCTGCCATGCAGCTTGCTCTAGGACTCTTGCTGTTGAGTTCTAGAGCATTT
TTAGAGATGTTTTGAGATAGATGGCCTNCATACCTATAATAGAAAGAGTCAAGAAGGCCT
GAAGATAGATCACATTTTAATCCAATCCTTGGTCTGTGTCACCCTGGCCCTGTCTAGGGC
CTTTGTGTAGCCATGAAACATCCTAGAGCCCTTTTGCCATAACATACAGGGCTTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCTGAGATGCCACCTACCCCTACCCTGGCAGTCCAGTCCCACACCCCCACTTTATTTTT
TCACCAGTGCTTACCGCTAATTTATATCCTCAGAGCCACAGAGTAGGTCCTTGATAAATA
TAAAAAAAACAGTGCATCTGTACTAGTGACAGCTGTACGCTAGTGAGATACAATCCCATT
TGCTCAGCATTTCCTTGTTTGCTGCCTTTTGCAAGAATTAGAAATACATTAATAGATTAA
TTCCTAAAAAGAGGGTGGCTAATGGTAGCAAGGAATATGCTTAAGAGGGGATGACGTATG
TAATTCTTTATGAGAATGCTAAGATAAGGAAATGGAAAAATTCTAAATTCTGCCCAAGAC
TTTGTGGGTACTGCTCCCATCATTCACTTCTCCACAAAATGAGATCGTGCACCCTTCCCT
AAAACAGAAGCAAATATATATCTGTGTCTTCCTACTGTCATTTGAAGGGTAATGCTTCAG
AGTCATCATCAAGAACAGAGGACAAAGTGCATTTCGTTTGTGGCTGGGCTTCCTTTTCAG
TGATGCTTCTCAAAGGAAGGCTGAAGAACTAAAAAGAGGCCCATGCCCTTCCACTTGTCA
GGGAAGGACGCTGCCATGCAGCTTGCTCTAGGACTCTTGCTGTTGAGTTCTAGAGCATTT
TTAGAGATGTTTTGAGATAGATGGCCTNCATACCTATAATAGAAAGAGTCAAGAAGGCCT
GAAGATAGATCACATTTTAATCCAATCCTTGGTCTGTGTCACCCTGGCCCTGTCTAGGGC
CTTTGTGTAGCCATGAAACATCCTAGAGCCCTTTTGCCATAACATACAGGGCTTGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               502-686, + strand, RNAz p=0.999909

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               502-686, + strand, RNAz p=0.999909

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               13-836, gnl|bosTau2|chr17 (35961613-35960778)
               

               
               13-836, gnl|Hg17|chr12 (108851298-108850441)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-836, gnl|bosTau2|chr17 (35961613-35960778)
               

               
               13-836, gnl|Hg17|chr12 (108851298-108850441)

	13-836, gnl\|bosTau2\|chr17 (35961613-35960778)
	13-836, gnl\|Hg17\|chr12 (108851298-108850441)