Non-Coding RNA Search

Lng1-LNG010068D10

Sequence:


               
               AATAAATACTCAGAATGAAAGGAATGCAGGAAAGAAAAAAGAACGAAGGAAAAAAGGAAA
TGAAAAACCTGTCTTGATTTCTTCGAGAAAATTAGTTTTTAAGATGCCCTTGGTGTAGCA
ATTCCATCCGTGCCTTGCCGTGCAAGATGCCCGGGGAGAGTTCTTCCAAAATGTACGTCC
CCTTGGCTACGTCCCCTTGGCTAGACCTTGGTGTTCCGTGTAGGCTGAGGTTCAGTAATT
CTGGGAGAGTAGAAAGGTTTTCCAATACCCTGTCAAGCGGGAAGAAGAGGCCTTAGGAAC
CACAAAACTGGATACTTTGTAAGGTACAGAACACTCAGCACTTTCCTCTGAGGAGAGAAC
ACACAACTGGCACGAAAGCGACCCACGCAATGAGGCGAGGGGGAGAATGTGCAAAAGGGG
GCCGTCCAGCCCTTCGTTCCCCCAAGCGTCGCAAAGGGCATCTCTCAGTACCCCGCCTGT
GTCTGAGCCCATGCAAAACCCTGGTCCCCCTGCAGTGCCCTTTGGGGGCCAACGTGAAGC
GGATGGTAACATCGAGAAGGCTGGCATCGGGGAAGGTGGTATTTTCTTGGCGCTTTCCCC
CCTGTGGTTTTCACCATCTGTTTCTTTTAATGCATAAACACGGAAAATGACTGGTTAGGA
ATGCGAAGTTTTTAAAAAACCAGATGACCACAGGCATCCTCTAAATGAGAAAGGGAGAGC
ACGCTGGGTTCTGTGACATTTGTCAGGAAGTGAGATGTTAACGACCAGGACACATTCACC
GCCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATAAATACTCAGAATGAAAGGAATGCAGGAAAGAAAAAAGAACGAAGGAAAAAAGGAAA
TGAAAAACCTGTCTTGATTTCTTCGAGAAAATTAGTTTTTAAGATGCCCTTGGTGTAGCA
ATTCCATCCGTGCCTTGCCGTGCAAGATGCCCGGGGAGAGTTCTTCCAAAATGTACGTCC
CCTTGGCTACGTCCCCTTGGCTAGACCTTGGTGTTCCGTGTAGGCTGAGGTTCAGTAATT
CTGGGAGAGTAGAAAGGTTTTCCAATACCCTGTCAAGCGGGAAGAAGAGGCCTTAGGAAC
CACAAAACTGGATACTTTGTAAGGTACAGAACACTCAGCACTTTCCTCTGAGGAGAGAAC
ACACAACTGGCACGAAAGCGACCCACGCAATGAGGCGAGGGGGAGAATGTGCAAAAGGGG
GCCGTCCAGCCCTTCGTTCCCCCAAGCGTCGCAAAGGGCATCTCTCAGTACCCCGCCTGT
GTCTGAGCCCATGCAAAACCCTGGTCCCCCTGCAGTGCCCTTTGGGGGCCAACGTGAAGC
GGATGGTAACATCGAGAAGGCTGGCATCGGGGAAGGTGGTATTTTCTTGGCGCTTTCCCC
CCTGTGGTTTTCACCATCTGTTTCTTTTAATGCATAAACACGGAAAATGACTGGTTAGGA
ATGCGAAGTTTTTAAAAAACCAGATGACCACAGGCATCCTCTAAATGAGAAAGGGAGAGC
ACGCTGGGTTCTGTGACATTTGTCAGGAAGTGAGATGTTAACGACCAGGACACATTCACC
GCCCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               523-629, + strand, RNAz p=0.511683

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               523-629, + strand, RNAz p=0.511683

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-761, gnl|bosTau2|chr23 (34855816-34856554)
               

               
               1-761, gnl|Hg17|chr6 (11305512-11304726)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-761, gnl|bosTau2|chr23 (34855816-34856554)
               

               
               1-761, gnl|Hg17|chr6 (11305512-11304726)

	1-761, gnl\|bosTau2\|chr23 (34855816-34856554)
	1-761, gnl\|Hg17\|chr6 (11305512-11304726)