Lng1-LNG010068F11
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATTTCTTTTTTTCAGCTCACCTACACACACACACACTAAATGTTTATTTGAAACATGTT GAAGGACATTTTGCCCTCTTATCTCATGAGCAATCCAACCGTTTTGGCAAGACAAGTTAG TTAAAACTAATGGTTATCACAAACAACTTCAAGTCACAAGACACAGTTGTTGTTTGTTTT GTTTTGTTTTATTTTCCAATGATGTAGGGGTTTATTGTTTAGTCTGTGGCCATGGAGCCT ATATTGAAGTGGGTAGCCCTTTGGCTCTGAAAATGGGCAGACGGAAGCCCTCTTGCAAAG TTGTCTTTTGTGTTTGTGTACCTGCCAGGGAGGGAGGTTAGTTTAGTTTTAGTTAGAGCA ATTCTGCAACCAGGGTTCTTTAGGACAATTGCAATTTCACTTGTCCTGATAGCATTTGGT TTTAAAAATACAGTGCACATGAGACATTTAGTCAAACTCTCATAAACCCCCCTGTAAGAA TATGCATATAAGACATCTGGTTACCAGGTAGTTGCTCGTGAATTTTCACTAATAATCTTA ACGGTCCTTGAGTTGGCTGAGAATTCCAAAGAAGGCGCTGGTATCTGACAAACGTCAGAA ATTCCTTGACTGCCAAGGCCCTGTTGTGGGAGATAAAACTACCCTCGGTTTGCCACGTAC CAAGAGAAAAAAAAACCCCGGATGTACAGAGTCCCATTGTAACGCCTCACCAAGCTCGAT GAATTGTGACAGAGCGGTTGATACACTATGGCTTCTGTGGGCAGCATCTTTGGAACCCCT GTGAATTCCTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATTTCTTTTTTTCAGCTCACCTACACACACACACACTAAATGTTTATTTGAAACATGTT GAAGGACATTTTGCCCTCTTATCTCATGAGCAATCCAACCGTTTTGGCAAGACAAGTTAG TTAAAACTAATGGTTATCACAAACAACTTCAAGTCACAAGACACAGTTGTTGTTTGTTTT GTTTTGTTTTATTTTCCAATGATGTAGGGGTTTATTGTTTAGTCTGTGGCCATGGAGCCT ATATTGAAGTGGGTAGCCCTTTGGCTCTGAAAATGGGCAGACGGAAGCCCTCTTGCAAAG TTGTCTTTTGTGTTTGTGTACCTGCCAGGGAGGGAGGTTAGTTTAGTTTTAGTTAGAGCA ATTCTGCAACCAGGGTTCTTTAGGACAATTGCAATTTCACTTGTCCTGATAGCATTTGGT TTTAAAAATACAGTGCACATGAGACATTTAGTCAAACTCTCATAAACCCCCCTGTAAGAA TATGCATATAAGACATCTGGTTACCAGGTAGTTGCTCGTGAATTTTCACTAATAATCTTA ACGGTCCTTGAGTTGGCTGAGAATTCCAAAGAAGGCGCTGGTATCTGACAAACGTCAGAA ATTCCTTGACTGCCAAGGCCCTGTTGTGGGAGATAAAACTACCCTCGGTTTGCCACGTAC CAAGAGAAAAAAAAACCCCGGATGTACAGAGTCCCATTGTAACGCCTCACCAAGCTCGAT GAATTGTGACAGAGCGGTTGATACACTATGGCTTCTGTGGGCAGCATCTTTGGAACCCCT GTGAATTCCTCT |
| Predicted RNA structure(s): 3 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
| 528-642, - strand, RNAz p=0.547408 | |
| 677-792, - strand, RNAz p=0.667025 | |
| 678-792, - strand, RNAz p=0.86651 |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 528-642, - strand, RNAz p=0.547408 | |
| 677-792, - strand, RNAz p=0.667025 | |
| 678-792, - strand, RNAz p=0.86651 |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-133, gnl|bosTau2|chr2 (15397251-15397121) | |
| 1-133, gnl|canFam2|chr36 (20497575-20497746) | |
| 1-133, gnl|hg17|chr2 (173919028-173919199) | |
| 1-133, gnl|Hg17|chr2 (173919049-173919170) | |
| 1-133, gnl|loxAfr1|scaffold_556 (124036-124246) | |
| 1-133, gnl|mm7|chr2 (72253111-72253225) | |
| 1-133, gnl|oryCun1|scaffold_211167 (23210-23387) | |
| 1-133, gnl|panTro1|chr13 (63560239-63560413) | |
| 1-133, gnl|rheMac2|chr12 (36854626-36854798) | |
| 1-133, gnl|rn3|chr3 (54772408-54772651) | |
| 211-792, gnl|bosTau2|chr2 (15396779-15396203) | |
| 211-792, gnl|canFam2|chr36 (20497747-20498131) | |
| 211-792, gnl|echTel1|scaffold_276149 (41676-41285) | |
| 211-792, gnl|hg17|chr2 (173919200-173919613) | |
| 211-792, gnl|Hg17|chr2 (173919230-173919767) | |
| 211-792, gnl|loxAfr1|scaffold_556 (124247-124660) | |
| 211-792, gnl|mm7|chr2 (72253226-72253573) | |
| 211-792, gnl|oryCun1|scaffold_211167 (23388-23756) | |
| 211-792, gnl|panTro1|chr13 (63560414-63560827) | |
| 211-792, gnl|rheMac2|chr12 (36854799-36855212) | |
| 211-792, gnl|rn3|chr3 (54772652-54772999) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-133, gnl|bosTau2|chr2 (15397251-15397121) | |
| 1-133, gnl|canFam2|chr36 (20497575-20497746) | |
| 1-133, gnl|hg17|chr2 (173919028-173919199) | |
| 1-133, gnl|Hg17|chr2 (173919049-173919170) | |
| 1-133, gnl|loxAfr1|scaffold_556 (124036-124246) | |
| 1-133, gnl|mm7|chr2 (72253111-72253225) | |
| 1-133, gnl|oryCun1|scaffold_211167 (23210-23387) | |
| 1-133, gnl|panTro1|chr13 (63560239-63560413) | |
| 1-133, gnl|rheMac2|chr12 (36854626-36854798) | |
| 1-133, gnl|rn3|chr3 (54772408-54772651) | |
| 211-792, gnl|bosTau2|chr2 (15396779-15396203) | |
| 211-792, gnl|canFam2|chr36 (20497747-20498131) | |
| 211-792, gnl|echTel1|scaffold_276149 (41676-41285) | |
| 211-792, gnl|hg17|chr2 (173919200-173919613) | |
| 211-792, gnl|Hg17|chr2 (173919230-173919767) | |
| 211-792, gnl|loxAfr1|scaffold_556 (124247-124660) | |
| 211-792, gnl|mm7|chr2 (72253226-72253573) | |
| 211-792, gnl|oryCun1|scaffold_211167 (23388-23756) | |
| 211-792, gnl|panTro1|chr13 (63560414-63560827) | |
| 211-792, gnl|rheMac2|chr12 (36854799-36855212) | |
| 211-792, gnl|rn3|chr3 (54772652-54772999) |