Lng1-LNG010070D05
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCTTCTACCTGGAGGAGCTGGACGAGGCCCGCGAGCGCTTCCTCGAGGCTGCCCGCGAG GACCCGGGCAACCTCAACGCCTGGGCCAATCTGGCACACGTGTACGGGCGCCTGGGGCAG GAGGAAGAGGAGGAGGCGTGCGCCGGGCGGCTGGCAGACCTCATGGGCCTGGAGGGGGAC CGCGGAGCCGCCGGAGACCCCCAGCTCCGCGCCGCGCGTTGCCTGGCGGAGCAGGGCTAC GCCCACGGCTTCGATGTGGGCTGCGCTGGTCCGGAAGAGCGCGCGCGAGTGCTGGAGGCC GGCATCGCCCTGTACGACAAGGCGCTGGGCTACGCACAGCAGATCCCGATGGAGGAGAAA CGGGGCTGGTACCTCACCATGGCAACGCTCTTCATCAGGTTAGATGGCATCTTCCTGGAG CTGGGCAGCAAGGAGCAGAAGAGGCTCCCAGCCTTCAACCGCACGCTGGCCCTGCTCCGG CAAGTCCTCAAGTCCTCAGACCCCTACCACCAAGCTCTGGCCTGGTGCTACCTTGGGATG CTGCTGGAGAGAAAAGACACCTTCTCCACCACCCCCATGGGCATCCACGACTGTGGGTAC TCAGGGACTGACCCCCTGGACTGCTTTGGCAAGGCCATTGAGATCGCCAAGGACAAACCC CCCATCCTGAATCGCCTGGCCAAAATCTTCCACTTCCTCGGAAAGCAGGACATGGCCATT GGCACCTGCAACATGGCCCTGGATGTCCTGCGGGATCCGGAGCTCAACTGGCNAGCGTAC TGCACAAGGGCCAAGGTGAGTCAACCTGCGGCTCCACCTCATCCTGCCATCGAGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCTTCTACCTGGAGGAGCTGGACGAGGCCCGCGAGCGCTTCCTCGAGGCTGCCCGCGAG GACCCGGGCAACCTCAACGCCTGGGCCAATCTGGCACACGTGTACGGGCGCCTGGGGCAG GAGGAAGAGGAGGAGGCGTGCGCCGGGCGGCTGGCAGACCTCATGGGCCTGGAGGGGGAC CGCGGAGCCGCCGGAGACCCCCAGCTCCGCGCCGCGCGTTGCCTGGCGGAGCAGGGCTAC GCCCACGGCTTCGATGTGGGCTGCGCTGGTCCGGAAGAGCGCGCGCGAGTGCTGGAGGCC GGCATCGCCCTGTACGACAAGGCGCTGGGCTACGCACAGCAGATCCCGATGGAGGAGAAA CGGGGCTGGTACCTCACCATGGCAACGCTCTTCATCAGGTTAGATGGCATCTTCCTGGAG CTGGGCAGCAAGGAGCAGAAGAGGCTCCCAGCCTTCAACCGCACGCTGGCCCTGCTCCGG CAAGTCCTCAAGTCCTCAGACCCCTACCACCAAGCTCTGGCCTGGTGCTACCTTGGGATG CTGCTGGAGAGAAAAGACACCTTCTCCACCACCCCCATGGGCATCCACGACTGTGGGTAC TCAGGGACTGACCCCCTGGACTGCTTTGGCAAGGCCATTGAGATCGCCAAGGACAAACCC CCCATCCTGAATCGCCTGGCCAAAATCTTCCACTTCCTCGGAAAGCAGGACATGGCCATT GGCACCTGCAACATGGCCCTGGATGTCCTGCGGGATCCGGAGCTCAACTGGCNAGCGTAC TGCACAAGGGCCAAGGTGAGTCAACCTGCGGCTCCACCTCATCCTGCCATCGAGAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 711-830, - strand, RNAz p=0.778014 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 711-830, - strand, RNAz p=0.778014 |
| Aligned organism(s): 43 entry(ies) | More info |
| Aligned organism(s): 43 entry(ies) | Help | Less info |
| 1-342, gnl|bosTau2|chr3 (60333782-60334123) | |
| 1-342, gnl|canFam2|chr5 (57364335-57364033) | |
| 1-342, gnl|danRer3|chr6 (14373191-14372904) | |
| 1-342, gnl|echTel1|scaffold_312114 (52824-53123) | |
| 1-342, gnl|fr1|chrUn (252061082-252061372) | |
| 1-342, gnl|hg17|chr1 (54978268-54978578) | |
| 1-342, gnl|Hg17|chr1 (54978632-54978291) | |
| 1-342, gnl|mm7|chr4 (105999564-105999271) | |
| 1-342, gnl|Mm7|chr4 (105999215-105999556) | |
| 1-342, gnl|monDom2|scaffold_40 (21190311-21190008) | |
| 1-342, gnl|oryCun1|scaffold_150168 (4254-3945) | |
| 1-342, gnl|panTro1|chr1 (53265478-53265788) | |
| 1-342, gnl|rheMac2|chr1 (57671929-57672238) | |
| 1-342, gnl|rn3|chr5 (127706030-127705737) | |
| 1-342, gnl|tetNig1|chr1 (15680194-15680473) | |
| 1-342, gnl|xenTro1|scaffold_197 (1200952-1201269) | |
| 396-521, gnl|bosTau2|chr3 (60349890-60350015) | |
| 396-521, gnl|canFam2|chr5 (57377480-57377110) | |
| 396-521, gnl|dasNov1|scaffold_36141 (33905-34275) | |
| 396-521, gnl|echTel1|scaffold_315345 (3016-3355) | |
| 396-521, gnl|hg17|chr1 (54965293-54965641) | |
| 396-521, gnl|Hg17|chr1 (54965523-54965398) | |
| 396-521, gnl|mm7|chr4 (106011078-106010763) | |
| 396-521, gnl|Mm7|chr4 (106010850-106010969) | |
| 396-521, gnl|monDom2|scaffold_40 (21215930-21215541) | |
| 396-521, gnl|oryCun1|scaffold_203847 (45341-45004) | |
| 396-521, gnl|rheMac2|chr1 (57658004-57658351) | |
| 396-521, gnl|rn3|chr5 (127716685-127716388) | |
| 632-836, gnl|bosTau2|chr3 (60352500-60352704) | |
| 632-836, gnl|canFam2|chr5 (57379552-57379396) | |
| 632-836, gnl|danRer3|chr6 (14377309-14377150) | |
| 632-836, gnl|dasNov1|scaffold_36141 (31360-31519) | |
| 632-836, gnl|fr1|chrUn (252060179-252060338) | |
| 632-836, gnl|Hg17|chr1 (54963840-54963636) | |
| 632-836, gnl|hg17|chr6 (100647910-100648066) | |
| 632-836, gnl|loxAfr1|scaffold_5936 (85122-84966) | |
| 632-836, gnl|mm7|chr4 (106013300-106013141) | |
| 632-836, gnl|Mm7|chr4 (106013140-106013324) | |
| 632-836, gnl|oryCun1|scaffold_203847 (46255-46099) | |
| 632-836, gnl|panTro1|chr1 (53251803-53251962) | |
| 632-836, gnl|rheMac2|chr4 (96003005-96003161) | |
| 632-836, gnl|rn3|chr5 (127718883-127718727) | |
| 632-836, gnl|tetNig1|chr1 (15679256-15679415) |
| Aligned organism(s): 43 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-342, gnl|bosTau2|chr3 (60333782-60334123) | |
| 1-342, gnl|canFam2|chr5 (57364335-57364033) | |
| 1-342, gnl|danRer3|chr6 (14373191-14372904) | |
| 1-342, gnl|echTel1|scaffold_312114 (52824-53123) | |
| 1-342, gnl|fr1|chrUn (252061082-252061372) | |
| 1-342, gnl|hg17|chr1 (54978268-54978578) | |
| 1-342, gnl|Hg17|chr1 (54978632-54978291) | |
| 1-342, gnl|mm7|chr4 (105999564-105999271) | |
| 1-342, gnl|Mm7|chr4 (105999215-105999556) | |
| 1-342, gnl|monDom2|scaffold_40 (21190311-21190008) | |
| 1-342, gnl|oryCun1|scaffold_150168 (4254-3945) | |
| 1-342, gnl|panTro1|chr1 (53265478-53265788) | |
| 1-342, gnl|rheMac2|chr1 (57671929-57672238) | |
| 1-342, gnl|rn3|chr5 (127706030-127705737) | |
| 1-342, gnl|tetNig1|chr1 (15680194-15680473) | |
| 1-342, gnl|xenTro1|scaffold_197 (1200952-1201269) | |
| 396-521, gnl|bosTau2|chr3 (60349890-60350015) | |
| 396-521, gnl|canFam2|chr5 (57377480-57377110) | |
| 396-521, gnl|dasNov1|scaffold_36141 (33905-34275) | |
| 396-521, gnl|echTel1|scaffold_315345 (3016-3355) | |
| 396-521, gnl|hg17|chr1 (54965293-54965641) | |
| 396-521, gnl|Hg17|chr1 (54965523-54965398) | |
| 396-521, gnl|mm7|chr4 (106011078-106010763) | |
| 396-521, gnl|Mm7|chr4 (106010850-106010969) | |
| 396-521, gnl|monDom2|scaffold_40 (21215930-21215541) | |
| 396-521, gnl|oryCun1|scaffold_203847 (45341-45004) | |
| 396-521, gnl|rheMac2|chr1 (57658004-57658351) | |
| 396-521, gnl|rn3|chr5 (127716685-127716388) | |
| 632-836, gnl|bosTau2|chr3 (60352500-60352704) | |
| 632-836, gnl|canFam2|chr5 (57379552-57379396) | |
| 632-836, gnl|danRer3|chr6 (14377309-14377150) | |
| 632-836, gnl|dasNov1|scaffold_36141 (31360-31519) | |
| 632-836, gnl|fr1|chrUn (252060179-252060338) | |
| 632-836, gnl|Hg17|chr1 (54963840-54963636) | |
| 632-836, gnl|hg17|chr6 (100647910-100648066) | |
| 632-836, gnl|loxAfr1|scaffold_5936 (85122-84966) | |
| 632-836, gnl|mm7|chr4 (106013300-106013141) | |
| 632-836, gnl|Mm7|chr4 (106013140-106013324) | |
| 632-836, gnl|oryCun1|scaffold_203847 (46255-46099) | |
| 632-836, gnl|panTro1|chr1 (53251803-53251962) | |
| 632-836, gnl|rheMac2|chr4 (96003005-96003161) | |
| 632-836, gnl|rn3|chr5 (127718883-127718727) | |
| 632-836, gnl|tetNig1|chr1 (15679256-15679415) |