Lng1-LNG010070D12
|
TTATGTTAAATGAAACAGGTCAAGCCTCATAATATTTGTCTGAGGATAGCACCCTGTGAG
GACCATAAAGCTATCCATGAGATGCATCATATAAACTCTGGGGACTGAAAGATGCTACAC
TTTTGCTCTTCTGTCCTTAGGTGACACATGGTCAGTTGAGCTCTGTTGAATTGGATCCAT
CTTCTCAAATTGGCACTGTTAGTCTGTCTTTATTTGATCCCCATTAGAGATATAAGCTGA
GAGCTATGGTACTTGAGATGATGCAGTTCCTTTGCTAAAGTAATTAATGTAATAAAGGAG
AAATCCAAAGGAAAGTTGATTGTTTGTCATTAGAACCCTAGTTGGAAATTATGTTGATTT
GTGAGCAGGTGTGGCAGATGGCAAGTGAGATACCTCCTCTTTCAACTGGGTAAGCTTAGA
GCTGCCAAGGTTGGTTTACATGTTGTACTAGCGTCACCTGAATTTGGGTAAATATGATGT
GATTTCAGGGTGGTATTCAGGGAAGATGTGTAATATGGTTTTCTTCTAGCAACTTTGTTT
TGTCCCATTGGTTTATTGGTAATTCCCTAGGGCAACAAACCCTGTGACCCTCACACAATT
TAGATTTGAAGGTCTGTCAAGGGGATCAACAACCTAGTAGACTGAAACAGTTGGTAAAAT
AGATAGTCCAGATGTTAAAATCATGAGCCTTGAGATTGGTACCTTGGCCCTAGGGGATTT
TTTGAAGCTAGATGGAAGCTTTATGAGCCACATTTGAAAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTATGTTAAATGAAACAGGTCAAGCCTCATAATATTTGTCTGAGGATAGCACCCTGTGAG
GACCATAAAGCTATCCATGAGATGCATCATATAAACTCTGGGGACTGAAAGATGCTACAC
TTTTGCTCTTCTGTCCTTAGGTGACACATGGTCAGTTGAGCTCTGTTGAATTGGATCCAT
CTTCTCAAATTGGCACTGTTAGTCTGTCTTTATTTGATCCCCATTAGAGATATAAGCTGA
GAGCTATGGTACTTGAGATGATGCAGTTCCTTTGCTAAAGTAATTAATGTAATAAAGGAG
AAATCCAAAGGAAAGTTGATTGTTTGTCATTAGAACCCTAGTTGGAAATTATGTTGATTT
GTGAGCAGGTGTGGCAGATGGCAAGTGAGATACCTCCTCTTTCAACTGGGTAAGCTTAGA
GCTGCCAAGGTTGGTTTACATGTTGTACTAGCGTCACCTGAATTTGGGTAAATATGATGT
GATTTCAGGGTGGTATTCAGGGAAGATGTGTAATATGGTTTTCTTCTAGCAACTTTGTTT
TGTCCCATTGGTTTATTGGTAATTCCCTAGGGCAACAAACCCTGTGACCCTCACACAATT
TAGATTTGAAGGTCTGTCAAGGGGATCAACAACCTAGTAGACTGAAACAGTTGGTAAAAT
AGATAGTCCAGATGTTAAAATCATGAGCCTTGAGATTGGTACCTTGGCCCTAGGGGATTT
TTTGAAGCTAGATGGAAGCTTTATGAGCCACATTTGAAAG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
4-617, gnl|bosTau2|chr10 (30411574-30412198) |
|
4-617, gnl|canFam2|chr30 (31931176-31931662) |
|
4-617, gnl|dasNov1|scaffold_15307 (44148-44630) |
|
4-617, gnl|echTel1|scaffold_8556 (553-1035) |
|
4-617, gnl|hg17|chr15 (62570085-62570569) |
|
4-617, gnl|Hg17|chr15 (62570099-62570737) |
|
4-617, gnl|loxAfr1|scaffold_1222 (32778-32305) |
|
4-617, gnl|mm7|chr9 (65833049-65832575) |
|
4-617, gnl|Mm7|chr9 (65833033-65832407) |
|
4-617, gnl|monDom2|scaffold_12 (48934047-48933550) |
|
4-617, gnl|oryCun1|scaffold_212189 (59839-59366) |
|
4-617, gnl|panTro1|chr16 (63036450-63036934) |
|
4-617, gnl|rheMac2|chr7 (42936408-42936890) |
|
4-617, gnl|rn3|chr8 (70081666-70081181) |
| |
|
623-745, gnl|bosTau2|chr10 (30412225-30412346) |
|
623-745, gnl|Hg17|chr15 (62570751-62571174) |
|
623-745, gnl|Mm7|chr9 (65832400-65832224) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
4-617, gnl|bosTau2|chr10 (30411574-30412198) |
|
4-617, gnl|canFam2|chr30 (31931176-31931662) |
|
4-617, gnl|dasNov1|scaffold_15307 (44148-44630) |
|
4-617, gnl|echTel1|scaffold_8556 (553-1035) |
|
4-617, gnl|hg17|chr15 (62570085-62570569) |
|
4-617, gnl|Hg17|chr15 (62570099-62570737) |
|
4-617, gnl|loxAfr1|scaffold_1222 (32778-32305) |
|
4-617, gnl|mm7|chr9 (65833049-65832575) |
|
4-617, gnl|Mm7|chr9 (65833033-65832407) |
|
4-617, gnl|monDom2|scaffold_12 (48934047-48933550) |
|
4-617, gnl|oryCun1|scaffold_212189 (59839-59366) |
|
4-617, gnl|panTro1|chr16 (63036450-63036934) |
|
4-617, gnl|rheMac2|chr7 (42936408-42936890) |
|
4-617, gnl|rn3|chr8 (70081666-70081181) |
| |
|
623-745, gnl|bosTau2|chr10 (30412225-30412346) |
|
623-745, gnl|Hg17|chr15 (62570751-62571174) |
|
623-745, gnl|Mm7|chr9 (65832400-65832224) |
