Non-Coding RNA Search

Lng1-LNG010075C01

Sequence:


               
               TCGAGTCAGCCTTGTTAGCCTACACTTATAAATACAGTGAGGGTCCGGGAGCCAGGACCT
TCAGGCAAATCAGGCTTGTCTGGTCTGGTCTGGTCCGGCTGACTGAGCAAGTGAGCCTTC
TCTTTGCATGAGGCCTTCCTCAGCGTCACTGACTAAACTTGTTTGTCCCCAAAGCTAAAA
TGTCCCAAGGGACGGAGGGACAGTAGTCATCCATTTTCTTGCCAGACACTGTCCTAGTTG
GCGCAGGAAGTCATCCTAAAAGTCAGGAGGTACGTGGTTGGTCTGGGGACAGTGTTTGGA
AGTTAGGAATGTGGAACCACTTTTGAGTGTGAATTTATGTCCCTTCACAGAAACTATGCT
TGATCCTAGGAACTGGGTACTGTCACAAATGATACAACTATATAAATCACAGAACTGGAT
CTGTAAAGACTTGTATGAAAACAAGACTGTACCCCGCCAATGGCTGAGAGGGGTGGGTGA
AATTAGCTGACACCACTGGGAGTCAGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGAGTCAGCCTTGTTAGCCTACACTTATAAATACAGTGAGGGTCCGGGAGCCAGGACCT
TCAGGCAAATCAGGCTTGTCTGGTCTGGTCTGGTCCGGCTGACTGAGCAAGTGAGCCTTC
TCTTTGCATGAGGCCTTCCTCAGCGTCACTGACTAAACTTGTTTGTCCCCAAAGCTAAAA
TGTCCCAAGGGACGGAGGGACAGTAGTCATCCATTTTCTTGCCAGACACTGTCCTAGTTG
GCGCAGGAAGTCATCCTAAAAGTCAGGAGGTACGTGGTTGGTCTGGGGACAGTGTTTGGA
AGTTAGGAATGTGGAACCACTTTTGAGTGTGAATTTATGTCCCTTCACAGAAACTATGCT
TGATCCTAGGAACTGGGTACTGTCACAAATGATACAACTATATAAATCACAGAACTGGAT
CTGTAAAGACTTGTATGAAAACAAGACTGTACCCCGCCAATGGCTGAGAGGGGTGGGTGA
AATTAGCTGACACCACTGGGAGTCAGCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               212-309, - strand, RNAz p=0.998858

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               212-309, - strand, RNAz p=0.998858

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               24-508, gnl|bosTau2|chr15 (4282980-4283461)
               

               
               24-508, gnl|Hg17|chr11 (95601558-95601047)
               

               
               24-508, gnl|Mm7|chr9 (13334046-13334573)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               24-508, gnl|bosTau2|chr15 (4282980-4283461)
               

               
               24-508, gnl|Hg17|chr11 (95601558-95601047)
               

               
               24-508, gnl|Mm7|chr9 (13334046-13334573)

	24-508, gnl\|bosTau2\|chr15 (4282980-4283461)
	24-508, gnl\|Hg17\|chr11 (95601558-95601047)
	24-508, gnl\|Mm7\|chr9 (13334046-13334573)