Non-Coding RNA Search

Lng1-LNG010079F09

Sequence:


               
               CAatttgacccctagcctgggaacctctataggctgtgggtgtggccctaaaaagacaaa
aaaTACAAGTAAAATAAAGATTTCCTTTTGGAAACTTTGCTGTTTACAAGGGAAAATCCT
CCTTTTTGTTGCTTAAATGTTAAGCCATAGCCCTTGTGCACTGTTGTCCACAGCAACAAA
TCAGAGCTTGTGAATTTGAATGCTTTTGCTTACAGAGCCTAAGAGTTAAATGTCAGTCAG
GATACACACATTCCCTGATGCCAAGAAAAAATGTTTTCTCCTGTTGTTTTTTCCATTCAC
AGAAAAATCTTAACTCGAGTTATAACAATATGTTGCCTAAAGCAATGGTCTGAGTTTAAG
ATCAGCTCTGTCTGAGGCCCAAAGAGTATGAGAAGTAGTATTTTGAAGCTGTTGTTCATA
GGCTTGGTATGAAATATTTCTATTAACAAGATCCAGACTTTGCTATTTGTTTCAACCCAG
GTGGAGAATTCTTTCTTTTTTAATTAAAAAAAATTTTTATGGGGTTCCTGTCATgctcag
tggtaacaaactcaactagtatccatgaggacttgggttcgatccctggccttgctcatc
gggttaaggatctggcattgctgtaagctgtggtgtaggtcgagatgcagctcagatcct
gcattgctgtggctgtggagcaggccagcatctgcagctctgattagacccctggcctgg
gaactttcatatgatgcgagtgcagccttaataagacCAAAAAAAAAAAAAAAAACAATT
ATGTCCCCACCCACACCATATCAAAGTTCCTGGGCCAGGGTCAAATCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAatttgacccctagcctgggaacctctataggctgtgggtgtggccctaaaaagacaaa
aaaTACAAGTAAAATAAAGATTTCCTTTTGGAAACTTTGCTGTTTACAAGGGAAAATCCT
CCTTTTTGTTGCTTAAATGTTAAGCCATAGCCCTTGTGCACTGTTGTCCACAGCAACAAA
TCAGAGCTTGTGAATTTGAATGCTTTTGCTTACAGAGCCTAAGAGTTAAATGTCAGTCAG
GATACACACATTCCCTGATGCCAAGAAAAAATGTTTTCTCCTGTTGTTTTTTCCATTCAC
AGAAAAATCTTAACTCGAGTTATAACAATATGTTGCCTAAAGCAATGGTCTGAGTTTAAG
ATCAGCTCTGTCTGAGGCCCAAAGAGTATGAGAAGTAGTATTTTGAAGCTGTTGTTCATA
GGCTTGGTATGAAATATTTCTATTAACAAGATCCAGACTTTGCTATTTGTTTCAACCCAG
GTGGAGAATTCTTTCTTTTTTAATTAAAAAAAATTTTTATGGGGTTCCTGTCATgctcag
tggtaacaaactcaactagtatccatgaggacttgggttcgatccctggccttgctcatc
gggttaaggatctggcattgctgtaagctgtggtgtaggtcgagatgcagctcagatcct
gcattgctgtggctgtggagcaggccagcatctgcagctctgattagacccctggcctgg
gaactttcatatgatgcgagtgcagccttaataagacCAAAAAAAAAAAAAAAAACAATT
ATGTCCCCACCCACACCATATCAAAGTTCCTGGGCCAGGGTCAAATCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               78-186, - strand, RNAz p=0.518008

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               78-186, - strand, RNAz p=0.518008

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               78-491, gnl|bosTau2|chr9 (20403334-20402914)
               

               
               78-491, gnl|Hg17|chr6 (111600788-111601215)
               

               
               78-491, gnl|Mm7|chr10 (39867990-39867626)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               78-491, gnl|bosTau2|chr9 (20403334-20402914)
               

               
               78-491, gnl|Hg17|chr6 (111600788-111601215)
               

               
               78-491, gnl|Mm7|chr10 (39867990-39867626)

	78-491, gnl\|bosTau2\|chr9 (20403334-20402914)
	78-491, gnl\|Hg17\|chr6 (111600788-111601215)
	78-491, gnl\|Mm7\|chr10 (39867990-39867626)