Lng1-LNG010083G04
|
TTTCAGTGACCTTAATTTTTTGGAGATAAACTCTGTTTTCAGTCTCACAGTACTCAAGGA
AACATATATTACATCAAAATTCCTGAAGAGTTGGGGTTGTGTTTTAATCATCTCTAATTT
CTCAGGGCCTGCCACAAAGCTTGGCACTTGGTAGGTATTCAGTAATGTTATTCAGCATTG
CAGTAGTATATGAGGGTAGCTAGCATAGGAAAAAAAAAAGATAGGTCCCAAGTCTTCCTT
TCGAAAAGTTTCATTTGGGAGACAAGAATCTAGAAAAACATATCCCCCAGCTCAGGGCAT
TGTGTATGTATTGGATGAGTCCTGCAAGTTGTTAAACTCTATGGGATTTCAGAGGATCAG
TAATTGTTGGAAGCTAGGGGCAGTGATTAAAGGTGTCTTCAAGAAAGGGTTTTTAGAGAT
GAAAAGGGAGGGCAGGTACAAATGAAGAAAGCAATGAGCCAAGGTTCAAGGGTAAGAAGA
TGTGGGCAGTAAAGATTCAGAAGGATCGAGAACTCAAGGGCTTTGAAATTAAGCCTTATA
CTTGACTTAATATTTTTTTTTGGGGGGGAGAGGACATTAAAGGATATTAGAGTGGGGGAA
TAATAATATGTTTGGTAATGCTTTGTAGTTTATAAAACATGAGCATTTGAAGAAAGGTGA
GTTAAAGATGATTACTCTTTGATTTTAAAATGCTTCTGCCCTAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTTCAGTGACCTTAATTTTTTGGAGATAAACTCTGTTTTCAGTCTCACAGTACTCAAGGA
AACATATATTACATCAAAATTCCTGAAGAGTTGGGGTTGTGTTTTAATCATCTCTAATTT
CTCAGGGCCTGCCACAAAGCTTGGCACTTGGTAGGTATTCAGTAATGTTATTCAGCATTG
CAGTAGTATATGAGGGTAGCTAGCATAGGAAAAAAAAAAGATAGGTCCCAAGTCTTCCTT
TCGAAAAGTTTCATTTGGGAGACAAGAATCTAGAAAAACATATCCCCCAGCTCAGGGCAT
TGTGTATGTATTGGATGAGTCCTGCAAGTTGTTAAACTCTATGGGATTTCAGAGGATCAG
TAATTGTTGGAAGCTAGGGGCAGTGATTAAAGGTGTCTTCAAGAAAGGGTTTTTAGAGAT
GAAAAGGGAGGGCAGGTACAAATGAAGAAAGCAATGAGCCAAGGTTCAAGGGTAAGAAGA
TGTGGGCAGTAAAGATTCAGAAGGATCGAGAACTCAAGGGCTTTGAAATTAAGCCTTATA
CTTGACTTAATATTTTTTTTTGGGGGGGAGAGGACATTAAAGGATATTAGAGTGGGGGAA
TAATAATATGTTTGGTAATGCTTTGTAGTTTATAAAACATGAGCATTTGAAGAAAGGTGA
GTTAAAGATGATTACTCTTTGATTTTAAAATGCTTCTGCCCTAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-149, gnl|bosTau2|chr7 (1250609-1250463) |
|
1-149, gnl|Hg17|chr12 (12421269-12421396) |
| |
|
233-699, gnl|bosTau2|chr7 (1249939-1249477) |
|
233-699, gnl|canFam2|chr27 (36935346-36934910) |
|
233-699, gnl|dasNov1|scaffold_16201 (53235-52852) |
|
233-699, gnl|hg17|chr12 (12421681-12422120) |
|
233-699, gnl|Hg17|chr12 (12421821-12422274) |
|
233-699, gnl|oryCun1|scaffold_209328 (49896-50324) |
|
233-699, gnl|panTro1|chrUn_random (38672498-38672937) |
|
233-699, gnl|rheMac2|chr11 (12732756-12733193) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-149, gnl|bosTau2|chr7 (1250609-1250463) |
|
1-149, gnl|Hg17|chr12 (12421269-12421396) |
| |
|
233-699, gnl|bosTau2|chr7 (1249939-1249477) |
|
233-699, gnl|canFam2|chr27 (36935346-36934910) |
|
233-699, gnl|dasNov1|scaffold_16201 (53235-52852) |
|
233-699, gnl|hg17|chr12 (12421681-12422120) |
|
233-699, gnl|Hg17|chr12 (12421821-12422274) |
|
233-699, gnl|oryCun1|scaffold_209328 (49896-50324) |
|
233-699, gnl|panTro1|chrUn_random (38672498-38672937) |
|
233-699, gnl|rheMac2|chr11 (12732756-12733193) |
