Non-Coding RNA Search

Lng1-LNG010085B01

Sequence:


               
               ACTGGTTGTTGGTGGCTAAACCAGAATCACAGACTTCCATGCCTACAAGCCATGTGGATA
CCGCCAATGAGTGTATCAGGCTAGTGGGGAAAGGCCAAAATGGCAAGTTTATACCCATAT
AAACGGAGAACTAATTCTAAGTAAGCAAAGATAAAAACCACAACAACTTGTCAAATAAAA
CACATCTGTGGGCCCTATTTACCCATAACATCCCTGAAGGGGGGGAGGTCACTGAAAGTG
TATCCTCTCTCTTCTAAAATCATCAAATAAAGAACATTTCATCCACATCGGAATAAGCAA
CTAGTCCAAATTTGAGTAGCTCGGTAGAAGTCCCTAATTCTTTCCAAGTGTCTGTGGGAG
GCAGACCCTGGTTATCTGATTGTTCGTCGTTCTCCTGGTCAGAACAATGTGATTAGTGTC
CAGAAGTCACACTCTGGACTGATGTACCAAAAGCCCATGCCTCCTTGGAGGGACGTACCC
TATCAGGACCCAGAACTTCCTGGGCTCTGGGACTAGCATATTAATCTGGACCGGGTGAGA
AAGTTGGAGGAAGGGTAGAGATAAAGAAGATTAAACATCCACAGCTGGACAAGGACCGAC
CTGAAGCCTCAGCTGCTAAGTGGAGAGACCAGAAAACTCCTTCAGGCAGCCCCGCACATC
ACTCTGTGATAATTTGCCTTGCGGGTCCAGCCTGCTGGTGACCCTGAGCGCTTACCATTG
AGTCCTAATTGAACCACTATCCCCTTCCTGCACTGGAAGTAATGTGTGTTANGGAAATCA
ATCCATTTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGGTTGTTGGTGGCTAAACCAGAATCACAGACTTCCATGCCTACAAGCCATGTGGATA
CCGCCAATGAGTGTATCAGGCTAGTGGGGAAAGGCCAAAATGGCAAGTTTATACCCATAT
AAACGGAGAACTAATTCTAAGTAAGCAAAGATAAAAACCACAACAACTTGTCAAATAAAA
CACATCTGTGGGCCCTATTTACCCATAACATCCCTGAAGGGGGGGAGGTCACTGAAAGTG
TATCCTCTCTCTTCTAAAATCATCAAATAAAGAACATTTCATCCACATCGGAATAAGCAA
CTAGTCCAAATTTGAGTAGCTCGGTAGAAGTCCCTAATTCTTTCCAAGTGTCTGTGGGAG
GCAGACCCTGGTTATCTGATTGTTCGTCGTTCTCCTGGTCAGAACAATGTGATTAGTGTC
CAGAAGTCACACTCTGGACTGATGTACCAAAAGCCCATGCCTCCTTGGAGGGACGTACCC
TATCAGGACCCAGAACTTCCTGGGCTCTGGGACTAGCATATTAATCTGGACCGGGTGAGA
AAGTTGGAGGAAGGGTAGAGATAAAGAAGATTAAACATCCACAGCTGGACAAGGACCGAC
CTGAAGCCTCAGCTGCTAAGTGGAGAGACCAGAAAACTCCTTCAGGCAGCCCCGCACATC
ACTCTGTGATAATTTGCCTTGCGGGTCCAGCCTGCTGGTGACCCTGAGCGCTTACCATTG
AGTCCTAATTGAACCACTATCCCCTTCCTGCACTGGAAGTAATGTGTGTTANGGAAATCA
ATCCATTTGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               422-560, - strand, RNAz p=0.992905

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               422-560, - strand, RNAz p=0.992905

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               16-790, gnl|bosTau2|chr28 (29327792-29327041)
               

               
               16-790, gnl|Hg17|chr10 (49647280-49648076)
               

               
               16-790, gnl|Mm7|chr14 (30546176-30544974)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-790, gnl|bosTau2|chr28 (29327792-29327041)
               

               
               16-790, gnl|Hg17|chr10 (49647280-49648076)
               

               
               16-790, gnl|Mm7|chr14 (30546176-30544974)

	16-790, gnl\|bosTau2\|chr28 (29327792-29327041)
	16-790, gnl\|Hg17\|chr10 (49647280-49648076)
	16-790, gnl\|Mm7\|chr14 (30546176-30544974)