Lng1-LNG010086H02
|
TGCAAAAGCCACAGAAGGAAAAAAAAAAAAAAACCTGGATGAAGCTGCATCAAATGCCAG
CTATGGTTGAGTGTGAAAGGTAGAAGTCTGATTTTAATTTTTCTACCTGCTTTTCTGTGA
CTTATACATTATCTGTAATAAACGAGTACCACCTTCCTAAAGGAAAACCAAAATCATTAG
TGACATAGCCTTCTTTCTAATCTTGTAATCTTCTTCCCAATATATATGTCCATTATGCAA
TCCTATTTGTGGCCCGCTATCAGATCAGATTCCTAAAACATGTTTTTTTCCAGTCATTAT
CTTGCTTAAATCTTCAGAAGGGGCTCTTCTTGCTCTTGAGAAAAAGTCTAAACTTCTGGA
ATCCAAAGGTCTCCTTAATCTAGCCTCACCCTTCTGTCTGTCCCCTTATCTCCACCACAC
CCAGCCCTGTCCTCCTTTCTGGGTGGGCCAATGTCTCCCCTGTCCTGGAACCAGAAGAAC
TCTATCCAGGTCTTTGGCTTATGCTATGCTGCACATGGAGAGCCCCACACTCTTTGTCCC
TTTCTCTTTATCTGTCCAAGTGCTGCCTTTCTAAGCTTAGCCCAGACACTTCCTTCTCCT
GCTCACCTTTGTCGTGTTTTATCTGTATCAAGGATGGCAAACAGGTTTCATTATATATAC
CAGGTCTAGGCAATTGAAAATACATTGCATGGAGAATCCTGAGAGCTTTTCCAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGCAAAAGCCACAGAAGGAAAAAAAAAAAAAAACCTGGATGAAGCTGCATCAAATGCCAG
CTATGGTTGAGTGTGAAAGGTAGAAGTCTGATTTTAATTTTTCTACCTGCTTTTCTGTGA
CTTATACATTATCTGTAATAAACGAGTACCACCTTCCTAAAGGAAAACCAAAATCATTAG
TGACATAGCCTTCTTTCTAATCTTGTAATCTTCTTCCCAATATATATGTCCATTATGCAA
TCCTATTTGTGGCCCGCTATCAGATCAGATTCCTAAAACATGTTTTTTTCCAGTCATTAT
CTTGCTTAAATCTTCAGAAGGGGCTCTTCTTGCTCTTGAGAAAAAGTCTAAACTTCTGGA
ATCCAAAGGTCTCCTTAATCTAGCCTCACCCTTCTGTCTGTCCCCTTATCTCCACCACAC
CCAGCCCTGTCCTCCTTTCTGGGTGGGCCAATGTCTCCCCTGTCCTGGAACCAGAAGAAC
TCTATCCAGGTCTTTGGCTTATGCTATGCTGCACATGGAGAGCCCCACACTCTTTGTCCC
TTTCTCTTTATCTGTCCAAGTGCTGCCTTTCTAAGCTTAGCCCAGACACTTCCTTCTCCT
GCTCACCTTTGTCGTGTTTTATCTGTATCAAGGATGGCAAACAGGTTTCATTATATATAC
CAGGTCTAGGCAATTGAAAATACATTGCATGGAGAATCCTGAGAGCTTTTCCAT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
219-712, gnl|bosTau2|chr6 (31381751-31381282) |
|
219-712, gnl|canFam2|chr3 (74882394-74882067) |
|
219-712, gnl|dasNov1|scaffold_1962 (89216-89561) |
|
219-712, gnl|echTel1|scaffold_288387 (98349-98655) |
|
219-712, gnl|hg17|chr4 (40374058-40374458) |
|
219-712, gnl|Hg17|chr4 (40374550-40374057) |
|
219-712, gnl|panTro1|chr3 (43050191-43050567) |
|
219-712, gnl|rheMac2|chr5 (35561432-35561823) |
| |
|
373-703, gnl|bosTau2|chr20 (14358992-14359321) |
|
373-703, gnl|Hg17|chr4 (40374438-40374057) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
219-712, gnl|bosTau2|chr6 (31381751-31381282) |
|
219-712, gnl|canFam2|chr3 (74882394-74882067) |
|
219-712, gnl|dasNov1|scaffold_1962 (89216-89561) |
|
219-712, gnl|echTel1|scaffold_288387 (98349-98655) |
|
219-712, gnl|hg17|chr4 (40374058-40374458) |
|
219-712, gnl|Hg17|chr4 (40374550-40374057) |
|
219-712, gnl|panTro1|chr3 (43050191-43050567) |
|
219-712, gnl|rheMac2|chr5 (35561432-35561823) |
| |
|
373-703, gnl|bosTau2|chr20 (14358992-14359321) |
|
373-703, gnl|Hg17|chr4 (40374438-40374057) |
