Lng1-LNG010089C02
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTGTTGATTCAGGGAGCAAAGCAACTGAGGCGGGCTTAAAACGAGGGGATCAGATATTA GAAGTGAATGGTCAAAACTTTGAAAATATTCAGCTGTCAAAAGCCATGGAAATTCTTAGA AATAACACACACTTATCTATCACTGTGAAAACCAATTTATTTGTATTTAAAGAACTTCTA ACGAGATTGTCAGAAGAGAAAAGAAATGGTGCCCCTCACCTTCCTAAAATCGGAGACATC AAAAAGGCCAGTCGCTACTCCATTCCAGATCTCGCTGTAGATGTCGAACAGGTGATAGGA CTTGAAAAGGTGAATAAAAAAAGCAAAGCCAATACTGTTGGTGGAAGGAACAAGCTAAAA AAGATACTTGACAAGACTCGGATTAGCATCTTGCCACAGAAACCATATAATGATATCGGG ATTGGTCAGTCTCAGGACGACAGCATAGTAGGATTAAGGCAGACGAAGCACATCCCAACT GCACTGCCCGTCAGTGGAACCTTATCCTCCAGTAATCCGGACTTACTGCAGTCCCACCAT CGCATTTTAGACTTCAGTACCACTCCTGACCTGCCAGATCAAGTGTTAAGGGTTTTTAGG GCTGATCAGCAAAGCCGACACATCATGATCAGCAAGGACACCACGGCAAAGGAGGTGGTC ATTCAGGCCATCCGGGAGTTTGCTGTGACTGCCACCCCAGATCAGTATTCACTCTGTGAA GTCTCTGTCACGCCTGANGGAGTAATCAAACAAAGACGACTTCCAGATCAGCTTTCCAAG CTTGCTGACAGAATACAGCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTGTTGATTCAGGGAGCAAAGCAACTGAGGCGGGCTTAAAACGAGGGGATCAGATATTA GAAGTGAATGGTCAAAACTTTGAAAATATTCAGCTGTCAAAAGCCATGGAAATTCTTAGA AATAACACACACTTATCTATCACTGTGAAAACCAATTTATTTGTATTTAAAGAACTTCTA ACGAGATTGTCAGAAGAGAAAAGAAATGGTGCCCCTCACCTTCCTAAAATCGGAGACATC AAAAAGGCCAGTCGCTACTCCATTCCAGATCTCGCTGTAGATGTCGAACAGGTGATAGGA CTTGAAAAGGTGAATAAAAAAAGCAAAGCCAATACTGTTGGTGGAAGGAACAAGCTAAAA AAGATACTTGACAAGACTCGGATTAGCATCTTGCCACAGAAACCATATAATGATATCGGG ATTGGTCAGTCTCAGGACGACAGCATAGTAGGATTAAGGCAGACGAAGCACATCCCAACT GCACTGCCCGTCAGTGGAACCTTATCCTCCAGTAATCCGGACTTACTGCAGTCCCACCAT CGCATTTTAGACTTCAGTACCACTCCTGACCTGCCAGATCAAGTGTTAAGGGTTTTTAGG GCTGATCAGCAAAGCCGACACATCATGATCAGCAAGGACACCACGGCAAAGGAGGTGGTC ATTCAGGCCATCCGGGAGTTTGCTGTGACTGCCACCCCAGATCAGTATTCACTCTGTGAA GTCTCTGTCACGCCTGANGGAGTAATCAAACAAAGACGACTTCCAGATCAGCTTTCCAAG CTTGCTGACAGAATACAGCT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 160-278, + strand, RNAz p=0.966729 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 160-278, + strand, RNAz p=0.966729 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 160-410, gnl|bosTau2|chr17 (21288891-21289141) | |
| 160-410, gnl|canFam2|chr15 (59348308-59348568) | |
| 160-410, gnl|danRer3|chrUn (157972971-157973284) | |
| 160-410, gnl|dasNov1|scaffold_3885 (81472-81208) | |
| 160-410, gnl|echTel1|scaffold_322812 (105361-105624) | |
| 160-410, gnl|fr1|chrUn (171010783-171010504) | |
| 160-410, gnl|galGal2|chr4 (22781254-22781527) | |
| 160-410, gnl|hg17|chr4 (160611196-160611460) | |
| 160-410, gnl|Hg17|chr4 (160611204-160611454) | |
| 160-410, gnl|loxAfr1|scaffold_34318 (1966-1702) | |
| 160-410, gnl|mm7|chr3 (79197099-79196842) | |
| 160-410, gnl|Mm7|chr3 (79197096-79196846) | |
| 160-410, gnl|monDom2|scaffold_9 (31735239-31735496) | |
| 160-410, gnl|oryCun1|scaffold_213384 (51430-51173) | |
| 160-410, gnl|panTro1|chr3 (178056507-178056771) | |
| 160-410, gnl|rheMac2|chr5 (151502349-151502613) | |
| 160-410, gnl|rn3|chr2 (170454778-170454521) | |
| 160-410, gnl|tetNig1|chr20 (1601468-1601761) | |
| 160-410, gnl|xenTro1|scaffold_231 (638510-638247) | |
| 411-568, gnl|bosTau2|chr17 (21294594-21294751) | |
| 411-568, gnl|canFam2|chr15 (59352628-59352768) | |
| 411-568, gnl|danRer3|chrUn (157973950-157974085) | |
| 411-568, gnl|dasNov1|scaffold_3885 (76913-76775) | |
| 411-568, gnl|echTel1|scaffold_187065 (1107-1246) | |
| 411-568, gnl|fr1|chrUn (171007335-171007234) | |
| 411-568, gnl|galGal2|chr4 (22785769-22785884) | |
| 411-568, gnl|hg17|chr4 (160617032-160617167) | |
| 411-568, gnl|Hg17|chr4 (160617068-160617225) | |
| 411-568, gnl|loxAfr1|scaffold_7604 (85650-85512) | |
| 411-568, gnl|mm7|chr3 (79193877-79193739) | |
| 411-568, gnl|Mm7|chr3 (79193836-79193679) | |
| 411-568, gnl|monDom2|scaffold_9 (31738457-31738595) | |
| 411-568, gnl|oryCun1|scaffold_213384 (46868-46733) | |
| 411-568, gnl|panTro1|chr3 (178062354-178062491) | |
| 411-568, gnl|rheMac2|chr5 (151507557-151507692) | |
| 411-568, gnl|rn3|chr2 (170450761-170450628) | |
| 411-568, gnl|tetNig1|chr20 (1601872-1601997) | |
| 411-568, gnl|xenTro1|scaffold_231 (635759-635629) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 160-410, gnl|bosTau2|chr17 (21288891-21289141) | |
| 160-410, gnl|canFam2|chr15 (59348308-59348568) | |
| 160-410, gnl|danRer3|chrUn (157972971-157973284) | |
| 160-410, gnl|dasNov1|scaffold_3885 (81472-81208) | |
| 160-410, gnl|echTel1|scaffold_322812 (105361-105624) | |
| 160-410, gnl|fr1|chrUn (171010783-171010504) | |
| 160-410, gnl|galGal2|chr4 (22781254-22781527) | |
| 160-410, gnl|hg17|chr4 (160611196-160611460) | |
| 160-410, gnl|Hg17|chr4 (160611204-160611454) | |
| 160-410, gnl|loxAfr1|scaffold_34318 (1966-1702) | |
| 160-410, gnl|mm7|chr3 (79197099-79196842) | |
| 160-410, gnl|Mm7|chr3 (79197096-79196846) | |
| 160-410, gnl|monDom2|scaffold_9 (31735239-31735496) | |
| 160-410, gnl|oryCun1|scaffold_213384 (51430-51173) | |
| 160-410, gnl|panTro1|chr3 (178056507-178056771) | |
| 160-410, gnl|rheMac2|chr5 (151502349-151502613) | |
| 160-410, gnl|rn3|chr2 (170454778-170454521) | |
| 160-410, gnl|tetNig1|chr20 (1601468-1601761) | |
| 160-410, gnl|xenTro1|scaffold_231 (638510-638247) | |
| 411-568, gnl|bosTau2|chr17 (21294594-21294751) | |
| 411-568, gnl|canFam2|chr15 (59352628-59352768) | |
| 411-568, gnl|danRer3|chrUn (157973950-157974085) | |
| 411-568, gnl|dasNov1|scaffold_3885 (76913-76775) | |
| 411-568, gnl|echTel1|scaffold_187065 (1107-1246) | |
| 411-568, gnl|fr1|chrUn (171007335-171007234) | |
| 411-568, gnl|galGal2|chr4 (22785769-22785884) | |
| 411-568, gnl|hg17|chr4 (160617032-160617167) | |
| 411-568, gnl|Hg17|chr4 (160617068-160617225) | |
| 411-568, gnl|loxAfr1|scaffold_7604 (85650-85512) | |
| 411-568, gnl|mm7|chr3 (79193877-79193739) | |
| 411-568, gnl|Mm7|chr3 (79193836-79193679) | |
| 411-568, gnl|monDom2|scaffold_9 (31738457-31738595) | |
| 411-568, gnl|oryCun1|scaffold_213384 (46868-46733) | |
| 411-568, gnl|panTro1|chr3 (178062354-178062491) | |
| 411-568, gnl|rheMac2|chr5 (151507557-151507692) | |
| 411-568, gnl|rn3|chr2 (170450761-170450628) | |
| 411-568, gnl|tetNig1|chr20 (1601872-1601997) | |
| 411-568, gnl|xenTro1|scaffold_231 (635759-635629) |