Non-Coding RNA Search

Lng1-LNG010091C07

Sequence:


               
               AATGTCACTGAGTGTGTACAGACGGGGGACTGTGCAGGAAGACGGGAGGGCATCTTAGGT
GGAAGAAAGAGAGTGGAAGGAGGAAACCTGGCAGGTCCAGGAACAGTAAGCGGGGATTGT
TTTCCTTCCTCGGTCTGAGCTTCTTGGTCAGCCTTTCTGATGCTATGAGACTTGGCCAGT
GTGTAATAAGCAACCCACGTTATGGGCACCGGAGGGGGCAGTGACTAACCAACTGAGGGC
TACCTTGCTCTGGGAGCCCAGGTCAGGTGGTGTAACCAGAAAGAAGCAGGAATTCAACTC
TGTCTCCGGTAATTGCTGTTTACAGTCTGGAGACAGATTCTTTCCATAAAGTTTTTAAGC
CAAGCAAAGGAGAGGCCCCGAGGCTTCTCTCTGGATTATTCCTATTTGCATGTCTCCTTC
TGTGCCCCCGATCCTGGCGCGTCTCCAACAGGCTTCTTCTGCACTGGGCATGAATCAGTG
TCCTGGTTTGGTGTTAGGAAAGATGTCCCTTTAGAGAATCTCCAAAATCACCCTCAGGAT
TCTGTTCTTGCCTCTACTTCATCATTTAAACCTGGAGATATGCCAACCCCTGACATTGTA
ATAGGAATTCACCAAATTCATCTTGGTTTTATACTCCAAGATGAATTTGTTTTCCCAATG
CCTCTTCCTCGATTTGCCTTCATCTCCTCATTTCTCAGGACTTCTCTTCTTTTTCTCATC
CTGAAAGGTAATTGAACTTGAGGGGGAGAGGGGAATCCTCCAAATCTTTTAGGTTACATA
TAAAATTTAGATATAGGAATTCCCACTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATGTCACTGAGTGTGTACAGACGGGGGACTGTGCAGGAAGACGGGAGGGCATCTTAGGT
GGAAGAAAGAGAGTGGAAGGAGGAAACCTGGCAGGTCCAGGAACAGTAAGCGGGGATTGT
TTTCCTTCCTCGGTCTGAGCTTCTTGGTCAGCCTTTCTGATGCTATGAGACTTGGCCAGT
GTGTAATAAGCAACCCACGTTATGGGCACCGGAGGGGGCAGTGACTAACCAACTGAGGGC
TACCTTGCTCTGGGAGCCCAGGTCAGGTGGTGTAACCAGAAAGAAGCAGGAATTCAACTC
TGTCTCCGGTAATTGCTGTTTACAGTCTGGAGACAGATTCTTTCCATAAAGTTTTTAAGC
CAAGCAAAGGAGAGGCCCCGAGGCTTCTCTCTGGATTATTCCTATTTGCATGTCTCCTTC
TGTGCCCCCGATCCTGGCGCGTCTCCAACAGGCTTCTTCTGCACTGGGCATGAATCAGTG
TCCTGGTTTGGTGTTAGGAAAGATGTCCCTTTAGAGAATCTCCAAAATCACCCTCAGGAT
TCTGTTCTTGCCTCTACTTCATCATTTAAACCTGGAGATATGCCAACCCCTGACATTGTA
ATAGGAATTCACCAAATTCATCTTGGTTTTATACTCCAAGATGAATTTGTTTTCCCAATG
CCTCTTCCTCGATTTGCCTTCATCTCCTCATTTCTCAGGACTTCTCTTCTTTTTCTCATC
CTGAAAGGTAATTGAACTTGAGGGGGAGAGGGGAATCCTCCAAATCTTTTAGGTTACATA
TAAAATTTAGATATAGGAATTCCCACTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               251-430, + strand, RNAz p=0.999925

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               251-430, + strand, RNAz p=0.999925

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               211-782, gnl|bosTau2|chr20 (26887698-26887104)
               

               
               211-782, gnl|Hg17|chr5 (32070522-32071043)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               211-782, gnl|bosTau2|chr20 (26887698-26887104)
               

               
               211-782, gnl|Hg17|chr5 (32070522-32071043)

	211-782, gnl\|bosTau2\|chr20 (26887698-26887104)
	211-782, gnl\|Hg17\|chr5 (32070522-32071043)