Lng1-LNG010093D07
|
GTCGATTTCTCCGAGCGCTCCAGGTTGGGAGCAATTCAGTTGATTTCCCCACTACCCCGC
CCCCCTTCCTCTTTTCTCCCCACCCCTCCCATCTCAGCCCGGTGGAGGATGAAGCGGCTG
CAGTGGCCCCAGCCCCAGCAGCGGCACCGGCGGTGGCTGCGGTGGGGGTGGCCGGAACTG
GGGTGGTGAAGAAGCGGTGGTGGCGGCGGCGGCGGTGGCGGTGGCTGAAGGATCGGCAGC
CGCCCCAGCCGCTTCCCCTGTGCTTCCCTTCCTCTTTAGTGCAGCCGGGAAGTTTTTCGC
TTCTGTGCATGTGTGCGTGAGTGTGGGTGTGTAAGGTGAAGGTTTGGTCGGCGTTTGTGC
AGGCGTTGGGTTTTTTGCCCACTTCTCTTCCCGTAACCCGGGTAGCTCCCGAGCCTGGGC
TGTGGCCCGAAGAGGGGGCGCGGCGGCGGGCTCTCTCCTTTTGTTGTTGTTTCCTCCGCC
TGTGGAGCTGAAGGGGGGACGCGCCTGGGTGGGGCGGCTCGGAGCCCGGGCCTGGTGGCC
CCCGGGGCTCCCGGGCGAGTAGAGCAGGGCAGAGGAGAGCGGGCTTCAACATGATGGCGG
CCGAGGCCGGCAGTGAGGAAGGCGGCCCGGTCACCGCCGGGGCAGCTGGAGGCGGCGCCG
CCGCGGGCTCGAGTGCTTATCCGGCAGCGTGTCGGGTG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GTCGATTTCTCCGAGCGCTCCAGGTTGGGAGCAATTCAGTTGATTTCCCCACTACCCCGC
CCCCCTTCCTCTTTTCTCCCCACCCCTCCCATCTCAGCCCGGTGGAGGATGAAGCGGCTG
CAGTGGCCCCAGCCCCAGCAGCGGCACCGGCGGTGGCTGCGGTGGGGGTGGCCGGAACTG
GGGTGGTGAAGAAGCGGTGGTGGCGGCGGCGGCGGTGGCGGTGGCTGAAGGATCGGCAGC
CGCCCCAGCCGCTTCCCCTGTGCTTCCCTTCCTCTTTAGTGCAGCCGGGAAGTTTTTCGC
TTCTGTGCATGTGTGCGTGAGTGTGGGTGTGTAAGGTGAAGGTTTGGTCGGCGTTTGTGC
AGGCGTTGGGTTTTTTGCCCACTTCTCTTCCCGTAACCCGGGTAGCTCCCGAGCCTGGGC
TGTGGCCCGAAGAGGGGGCGCGGCGGCGGGCTCTCTCCTTTTGTTGTTGTTTCCTCCGCC
TGTGGAGCTGAAGGGGGGACGCGCCTGGGTGGGGCGGCTCGGAGCCCGGGCCTGGTGGCC
CCCGGGGCTCCCGGGCGAGTAGAGCAGGGCAGAGGAGAGCGGGCTTCAACATGATGGCGG
CCGAGGCCGGCAGTGAGGAAGGCGGCCCGGTCACCGCCGGGGCAGCTGGAGGCGGCGCCG
CCGCGGGCTCGAGTGCTTATCCGGCAGCGTGTCGGGTG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
179-289, + strand, RNAmicro p=0.992714 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
179-289, + strand, RNAmicro p=0.992714 |
|
14-293, gnl|bosTau2|chr7 (54170266-54170541) |
|
14-293, gnl|canFam2|chr3 (24060890-24060577) |
|
14-293, gnl|dasNov1|scaffold_89160 (3153-3445) |
|
14-293, gnl|echTel1|scaffold_324830 (88286-88025) |
|
14-293, gnl|hg17|chr5 (86599434-86599717) |
|
14-293, gnl|Hg17|chr5 (86599464-86599723) |
|
14-293, gnl|mm7|chr13 (82357070-82356801) |
|
14-293, gnl|Mm7|chr13 (82357041-82356793) |
|
14-293, gnl|monDom2|scaffold_20 (13533717-13533386) |
|
14-293, gnl|panTro1|chr4 (28648032-28647749) |
|
14-293, gnl|rheMac2|chr6 (83517851-83518132) |
|
14-293, gnl|rn3|chr2 (14208766-14208500) |
| |
|
304-698, gnl|bosTau2|chr7 (54170633-54171032) |
|
304-698, gnl|Hg17|chr5 (86599751-86600132) |
|
304-698, gnl|Mm7|chr13 (82356770-82356389) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
14-293, gnl|bosTau2|chr7 (54170266-54170541) |
|
14-293, gnl|canFam2|chr3 (24060890-24060577) |
|
14-293, gnl|dasNov1|scaffold_89160 (3153-3445) |
|
14-293, gnl|echTel1|scaffold_324830 (88286-88025) |
|
14-293, gnl|hg17|chr5 (86599434-86599717) |
|
14-293, gnl|Hg17|chr5 (86599464-86599723) |
|
14-293, gnl|mm7|chr13 (82357070-82356801) |
|
14-293, gnl|Mm7|chr13 (82357041-82356793) |
|
14-293, gnl|monDom2|scaffold_20 (13533717-13533386) |
|
14-293, gnl|panTro1|chr4 (28648032-28647749) |
|
14-293, gnl|rheMac2|chr6 (83517851-83518132) |
|
14-293, gnl|rn3|chr2 (14208766-14208500) |
| |
|
304-698, gnl|bosTau2|chr7 (54170633-54171032) |
|
304-698, gnl|Hg17|chr5 (86599751-86600132) |
|
304-698, gnl|Mm7|chr13 (82356770-82356389) |
