Lng1-LNG010096A08
|
TCATTTGTTGTAACTGTTTCTTCCAGGTCCAGTATCTTGTTCGTTCCTTCTCAGGGAGAG
AGAACTTCATTCATCACCTTTGTTATGCCTTTGCATCTGCATTCATGCCATTTTTATCTG
ACACTACAGATTCTGTGGCTGTTATCGTCTCACGACTGTGTGGTTGGAACAGATTATATC
CGACAAGTTGAAAGCTCTGTGAAGGATAGAAAGAATTCAGATAAAAATCAAAGGCTTATT
TTTCTTGTAGTGGATGCAGGTTCTATTTTATTTAGACAACAGAAGGAAAGCATTGCACCA
GGAATATAGGGAAAGATATGGGGTATGTGTATGCATTTTTTTTTCATGGCTCTGTCCAAA
GTGGCTATACACTTTAGCACAAATTGACTCATATTTTCCCATTCCTCAAAGTGGTATTAG
AAAATAGTCAGCAACAACAGGAATTCTGTATGTATATATTTTTGCCTCTAGATCTTCTTA
GTAGATGGGCCACTGTATGGAAATAAGTCAGGCACTTTCTGAAGCTGTGTAATTCTTTCA
GGCAACTGAGGGACTATTTAGTAAATTAGTCCTTGGAATGGTACCCACAGAAGTTGTTGG
CTAGGGTGAGATGTACCCAGATCACCCCCTGGTGACCTGAAAGAGCTAACGAGTGCTTAA
CAGATTCTTAGAATTTTGCTAAATGAAAAACAAATAAAGCTCCCCAAATATCAGTTCTAC
AGTATGTATTGTGTAGGGGTAAGATGTANGCAGGGTTCTTGATTACACAAAGAAGCTTCT
GATCCTGGAGCATTGTAGCACAATGAAGATTCTAATGATGGGGTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TCATTTGTTGTAACTGTTTCTTCCAGGTCCAGTATCTTGTTCGTTCCTTCTCAGGGAGAG
AGAACTTCATTCATCACCTTTGTTATGCCTTTGCATCTGCATTCATGCCATTTTTATCTG
ACACTACAGATTCTGTGGCTGTTATCGTCTCACGACTGTGTGGTTGGAACAGATTATATC
CGACAAGTTGAAAGCTCTGTGAAGGATAGAAAGAATTCAGATAAAAATCAAAGGCTTATT
TTTCTTGTAGTGGATGCAGGTTCTATTTTATTTAGACAACAGAAGGAAAGCATTGCACCA
GGAATATAGGGAAAGATATGGGGTATGTGTATGCATTTTTTTTTCATGGCTCTGTCCAAA
GTGGCTATACACTTTAGCACAAATTGACTCATATTTTCCCATTCCTCAAAGTGGTATTAG
AAAATAGTCAGCAACAACAGGAATTCTGTATGTATATATTTTTGCCTCTAGATCTTCTTA
GTAGATGGGCCACTGTATGGAAATAAGTCAGGCACTTTCTGAAGCTGTGTAATTCTTTCA
GGCAACTGAGGGACTATTTAGTAAATTAGTCCTTGGAATGGTACCCACAGAAGTTGTTGG
CTAGGGTGAGATGTACCCAGATCACCCCCTGGTGACCTGAAAGAGCTAACGAGTGCTTAA
CAGATTCTTAGAATTTTGCTAAATGAAAAACAAATAAAGCTCCCCAAATATCAGTTCTAC
AGTATGTATTGTGTAGGGGTAAGATGTANGCAGGGTTCTTGATTACACAAAGAAGCTTCT
GATCCTGGAGCATTGTAGCACAATGAAGATTCTAATGATGGGGTT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-197, gnl|bosTau2|chr5 (38797393-38797182) |
|
1-197, gnl|canFam2|chr15 (40759477-40760110) |
|
1-197, gnl|dasNov1|scaffold_16673 (39355-39986) |
|
1-197, gnl|echTel1|scaffold_225318 (8796-9419) |
|
1-197, gnl|hg17|chr12 (97192339-97192966) |
|
1-197, gnl|Hg17|chr12 (97192574-97192378) |
|
1-197, gnl|loxAfr1|scaffold_12790 (38819-39435) |
|
1-197, gnl|mm7|chr10 (90943994-90943366) |
|
1-197, gnl|Mm7|chr10 (90943756-90943953) |
|
1-197, gnl|monDom2|scaffold_34 (17148862-17148244) |
|
1-197, gnl|oryCun1|scaffold_207950 (42808-42199) |
|
1-197, gnl|panTro1|chr10 (99627889-99628516) |
|
1-197, gnl|rheMac2|chr11 (99476662-99477291) |
|
1-197, gnl|rn3|chr7 (28402730-28402098) |
| |
|
223-825, gnl|bosTau2|chr5 (38796524-38795910) |
|
223-825, gnl|Hg17|chr12 (97192337-97191542) |
|
223-825, gnl|Mm7|chr10 (90943994-90944590) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-197, gnl|bosTau2|chr5 (38797393-38797182) |
|
1-197, gnl|canFam2|chr15 (40759477-40760110) |
|
1-197, gnl|dasNov1|scaffold_16673 (39355-39986) |
|
1-197, gnl|echTel1|scaffold_225318 (8796-9419) |
|
1-197, gnl|hg17|chr12 (97192339-97192966) |
|
1-197, gnl|Hg17|chr12 (97192574-97192378) |
|
1-197, gnl|loxAfr1|scaffold_12790 (38819-39435) |
|
1-197, gnl|mm7|chr10 (90943994-90943366) |
|
1-197, gnl|Mm7|chr10 (90943756-90943953) |
|
1-197, gnl|monDom2|scaffold_34 (17148862-17148244) |
|
1-197, gnl|oryCun1|scaffold_207950 (42808-42199) |
|
1-197, gnl|panTro1|chr10 (99627889-99628516) |
|
1-197, gnl|rheMac2|chr11 (99476662-99477291) |
|
1-197, gnl|rn3|chr7 (28402730-28402098) |
| |
|
223-825, gnl|bosTau2|chr5 (38796524-38795910) |
|
223-825, gnl|Hg17|chr12 (97192337-97191542) |
|
223-825, gnl|Mm7|chr10 (90943994-90944590) |
