Non-Coding RNA Search

Lng1-LNG010096G06

Sequence:


               
               TTTAAACACAACAACAAAGAGAGCCCTAGATTCGCAGAGGAAGAAACATAGCCTTCCATT
CCTCTTCTCATAGTGGAGGGCCAGCGGGAACACGTTGGGCCTCTTTCTACATCTTATTGG
TCCTTCCCCAAGAGAGGAAGGGGGGGCCCCTCTGGTCGTTGGTTGAACCCCATTTTTCTA
GGGGGCAGGGTCACTTCCCATCTCTACAGTATCAGTAGAGCCAACTTTAGCGGGACAACC
ACGCTATGTACTATTGTGATGAAGTGTACAGTTTGTCCATGGCCCCATCCCTACTTATGA
GTGGGTAGGGGGTTCAGAGTCTCTCTGGTCATCCCACTCATTTCTCTTCCTCCCGACCTA
AATGTGCAAACCCCATGGTTTGGGGTGGAAGGCTCTCTCGGAGCCCCAGGTCTGCACAGG
CCACAAGCACTTCAAGAGAACTTAACCATAGAGATGACCCTTTTGGAACGAGCCAGAGAA
AAGTAGTTAGCATCTAATGTATGAAATGAAATCCCAGGTTCTCCTTACATATACCGTTTT
AGTTGGTACAACAGTCACGCAGTTTTCAATCCTCATTAACACAGGCCGCATTTATCGGTC
TCCCCCATGACAACATAATTAGTATTCTAAGGATATTTTTCACCAGCTGCTTATGTCTTC
AAGTTAAAAGTCAACAGCTAAATATACAGCATGGCAAGAGCATAAACAGTGAAATTGATT
TTAGTACTCAAAAGGACTTGATTTTCTATATTTATAGCTGTAATTAGAGAAAGGCTTAAT
GCCTTATATAATCGGTTCTTTATTGGAAGTTTCACAACCGAAGACTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAAACACAACAACAAAGAGAGCCCTAGATTCGCAGAGGAAGAAACATAGCCTTCCATT
CCTCTTCTCATAGTGGAGGGCCAGCGGGAACACGTTGGGCCTCTTTCTACATCTTATTGG
TCCTTCCCCAAGAGAGGAAGGGGGGGCCCCTCTGGTCGTTGGTTGAACCCCATTTTTCTA
GGGGGCAGGGTCACTTCCCATCTCTACAGTATCAGTAGAGCCAACTTTAGCGGGACAACC
ACGCTATGTACTATTGTGATGAAGTGTACAGTTTGTCCATGGCCCCATCCCTACTTATGA
GTGGGTAGGGGGTTCAGAGTCTCTCTGGTCATCCCACTCATTTCTCTTCCTCCCGACCTA
AATGTGCAAACCCCATGGTTTGGGGTGGAAGGCTCTCTCGGAGCCCCAGGTCTGCACAGG
CCACAAGCACTTCAAGAGAACTTAACCATAGAGATGACCCTTTTGGAACGAGCCAGAGAA
AAGTAGTTAGCATCTAATGTATGAAATGAAATCCCAGGTTCTCCTTACATATACCGTTTT
AGTTGGTACAACAGTCACGCAGTTTTCAATCCTCATTAACACAGGCCGCATTTATCGGTC
TCCCCCATGACAACATAATTAGTATTCTAAGGATATTTTTCACCAGCTGCTTATGTCTTC
AAGTTAAAAGTCAACAGCTAAATATACAGCATGGCAAGAGCATAAACAGTGAAATTGATT
TTAGTACTCAAAAGGACTTGATTTTCTATATTTATAGCTGTAATTAGAGAAAGGCTTAAT
GCCTTATATAATCGGTTCTTTATTGGAAGTTTCACAACCGAAGACTTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               102-219, + strand, RNAz p=0.99386

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               102-219, + strand, RNAz p=0.99386

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-828, gnl|bosTau2|chr19 (1425624-1426455)
               

               
               1-828, gnl|Hg17|chr17 (51612384-51613243)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-828, gnl|bosTau2|chr19 (1425624-1426455)
               

               
               1-828, gnl|Hg17|chr17 (51612384-51613243)

	1-828, gnl\|bosTau2\|chr19 (1425624-1426455)
	1-828, gnl\|Hg17\|chr17 (51612384-51613243)