Non-Coding RNA Search

Lng1-LNG010097C05

Sequence:


               
               AATTACATTTGCCATAACCCAATTTCCAAAGAAGGTCACATTATTTCTACCTTGGAATCT
TTGGTCCCTTCTTATCCGGGGTGCTAAATCTTTTTCACTTTCGTTATTGGTGCCAATCAG
TTGGAGCGATTACCTGGAGTGTTGTATAGAGAAGGGTTATAAATTGACATCCAGGATTAA
TAGGAAAGATGACTAGAATTAGCTCATATTTTGTTCATGGGTACAGGAAATTAGGAATAA
GGTTTTTGTCATGTGCCTATTCACTCAAGGAGCGGAAAACTTTAAAATCTTGCTTCTCAT
CCATGAAGTAGGAACCTTGCCAAAAAAATGAAAAACCTGAGAAAGAATTGCGTTTCTCAG
ATCTCTGCATTTGAGATGACATACAAAAGGTGATTGCTAATTTGCAGTCTCACTACGTTC
AGTCATCCTTGCAGGGCCATTCAGCCTATCCCATGAAGATGATCTAATCTTCAATAGAAC
TCAACTATTTCGTAATGACAGTGAAGGGAATTAAAACTCTAGAAAGACATGATCAGTGGG
CTTTCTAAGTGGTTTCTGAACCAGATAGGAAATGATCTTCTGGAAGCAGATTCTTCCAGA
TCTCGACACCCATAGCATCAAAACCACTTGATGGTGATAGCTGCTGTAGAAATCCAAGCA
AGTGGAGGAATGCCCACCTCGAGCTAGCCAAGCTTGGTACTGGAGCCAAAAGACGGGGAA
TGATAGAAAGCCAGTTGTCTGTATCATTGTATGAAAGTACATACAAAGGAAGTACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTACATTTGCCATAACCCAATTTCCAAAGAAGGTCACATTATTTCTACCTTGGAATCT
TTGGTCCCTTCTTATCCGGGGTGCTAAATCTTTTTCACTTTCGTTATTGGTGCCAATCAG
TTGGAGCGATTACCTGGAGTGTTGTATAGAGAAGGGTTATAAATTGACATCCAGGATTAA
TAGGAAAGATGACTAGAATTAGCTCATATTTTGTTCATGGGTACAGGAAATTAGGAATAA
GGTTTTTGTCATGTGCCTATTCACTCAAGGAGCGGAAAACTTTAAAATCTTGCTTCTCAT
CCATGAAGTAGGAACCTTGCCAAAAAAATGAAAAACCTGAGAAAGAATTGCGTTTCTCAG
ATCTCTGCATTTGAGATGACATACAAAAGGTGATTGCTAATTTGCAGTCTCACTACGTTC
AGTCATCCTTGCAGGGCCATTCAGCCTATCCCATGAAGATGATCTAATCTTCAATAGAAC
TCAACTATTTCGTAATGACAGTGAAGGGAATTAAAACTCTAGAAAGACATGATCAGTGGG
CTTTCTAAGTGGTTTCTGAACCAGATAGGAAATGATCTTCTGGAAGCAGATTCTTCCAGA
TCTCGACACCCATAGCATCAAAACCACTTGATGGTGATAGCTGCTGTAGAAATCCAAGCA
AGTGGAGGAATGCCCACCTCGAGCTAGCCAAGCTTGGTACTGGAGCCAAAAGACGGGGAA
TGATAGAAAGCCAGTTGTCTGTATCATTGTATGAAAGTACATACAAAGGAAGTACT

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

Help | Less info


               
               347-501, - strand, RNAz p=0.968869
               

               
               578-686, - strand, RNAz p=0.801192

Predicted RNA structure(s): 2 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               347-501, - strand, RNAz p=0.968869
               

               
               578-686, - strand, RNAz p=0.801192

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               35-750, gnl|bosTau2|chr15 (40044218-40043512)
               

               
               35-750, gnl|Hg17|chr11 (35065343-35066067)
               

               
               35-750, gnl|Mm7|chr2 (102792445-102791687)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               35-750, gnl|bosTau2|chr15 (40044218-40043512)
               

               
               35-750, gnl|Hg17|chr11 (35065343-35066067)
               

               
               35-750, gnl|Mm7|chr2 (102792445-102791687)

	347-501, - strand, RNAz p=0.968869
	578-686, - strand, RNAz p=0.801192

	35-750, gnl\|bosTau2\|chr15 (40044218-40043512)
	35-750, gnl\|Hg17\|chr11 (35065343-35066067)
	35-750, gnl\|Mm7\|chr2 (102792445-102791687)