Non-Coding RNA Search

Lng1-LNG010097G12

Sequence:


               
               TACTTCATTTCCCTGAAAGCGGAGAGCTTGGAGGTCTGCTCCGCCCCTGACCGAAAGGGG
CCTGGCCTTGAGGCTGGGGACAGCAGAGCGGGGAGCCTGGGGACTACCCCCGAGGGTGTC
CACCAAGGGGCAGCCGGGAAGGGGAGGGCTGGGTGGGCAGTGAGGCCAGAGGGCCAGGTG
GGGCTGGATGCTCCCTCGGCCTCCCGGGCACCAGGCCAGCGCTGACGCCATGCATTCCTT
GTGACATCTCCCAGGCTGCTCAGCCAAACCCATTCCCACGTGCAGTTCGGCAGGGAGGGG
CGTGGCCCGGAAACCTGGGGCGACAGTGTGGTCTGCAGGCCGTGTGAGCACGGCCCACCC
CCCTTTTCGGCTGCAATGCAGCGACTTGATGTGAAATCTCAgttcccagaccagggattg
aacccgggccccagtggtgaaagcactgagtcctaaccactagactaccagggaGTTCCC
ACAACCCGTTTCCAAATCACCGCTCATGCACCCCCTGCCCCTCTAGCTGGTGAGGTCTCG
CGCTCACCCCCAAAGAAGCAGACGCAGCCCCATTGCAAAAGTCGTGTCTTGACTGTGCTC
CTCGCAGCCCTCTGAGCTGACTGAGTCACATGCAGGCAGATAGGAGTGCCCCAGTCGTCC
AGGACCAGGCTCTGAAAAATACAGTCACTTCCTTACAGCTTTCATAGGGCAGAGCGCAGG
CTGTGTGTCTGGGGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACTTCATTTCCCTGAAAGCGGAGAGCTTGGAGGTCTGCTCCGCCCCTGACCGAAAGGGG
CCTGGCCTTGAGGCTGGGGACAGCAGAGCGGGGAGCCTGGGGACTACCCCCGAGGGTGTC
CACCAAGGGGCAGCCGGGAAGGGGAGGGCTGGGTGGGCAGTGAGGCCAGAGGGCCAGGTG
GGGCTGGATGCTCCCTCGGCCTCCCGGGCACCAGGCCAGCGCTGACGCCATGCATTCCTT
GTGACATCTCCCAGGCTGCTCAGCCAAACCCATTCCCACGTGCAGTTCGGCAGGGAGGGG
CGTGGCCCGGAAACCTGGGGCGACAGTGTGGTCTGCAGGCCGTGTGAGCACGGCCCACCC
CCCTTTTCGGCTGCAATGCAGCGACTTGATGTGAAATCTCAgttcccagaccagggattg
aacccgggccccagtggtgaaagcactgagtcctaaccactagactaccagggaGTTCCC
ACAACCCGTTTCCAAATCACCGCTCATGCACCCCCTGCCCCTCTAGCTGGTGAGGTCTCG
CGCTCACCCCCAAAGAAGCAGACGCAGCCCCATTGCAAAAGTCGTGTCTTGACTGTGCTC
CTCGCAGCCCTCTGAGCTGACTGAGTCACATGCAGGCAGATAGGAGTGCCCCAGTCGTCC
AGGACCAGGCTCTGAAAAATACAGTCACTTCCTTACAGCTTTCATAGGGCAGAGCGCAGG
CTGTGTGTCTGGGGTG

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               474-403, tRNA Glu : RF00005;tRNA; (AJ410870.2/121779-121850), RaveNnA 
Score=51.15

ncRNA annotation: 1 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               474-403, tRNA Glu : RF00005;tRNA; (AJ410870.2/121779-121850), RaveNnA 
Score=51.15