Non-Coding RNA Search

Lng1-LNG010099A09

Sequence:


               
               ATTGACATGTAACATCATGTACGTGTAAAGAGTACAACATGGTGATTTGATTTGTCCTTA
GGTGTTTACCAGGGCACGTGGCCAGTGCTCACGAGTTCTCCCTGAGCACTGGAGGCCTGG
AGTGTCACAATCGTGCCTGGTCAGGGCGGTGGGGCGGTAGCAGGTCGTGGGAACCAGAGA
CTTAAGTTTTCTGTCTCTGCGGTAGGAGGGTCCTCCTGGTAGAGGAAGACGGCCTCCCCA
CCGCAGGGAGCTGGTGCTGGGCTGAGCCAATAATCAGCAGCCTCAGCTTCCAGGGACTTC
TTGGGAAAGAAACAAACAAACAAAAAAATGGTGTTAATTAAAAAACAGCACCACCAAAAT
TCAATCCCATAATTCCTTTTTTTTGAAAAAATAACGTTCTCAACTCTCGGATCCTATGGA
TACTTAGCATAGCATGATCCTTCCCAGGCTTGCAGCTTTAAAACCTGCCCGGTCGTCTCC
GTGCCTGTCAGGGAGAGCTAGAGATCCCCCTGCTGCCCCACCCGGACCTGGTGGCCGGCG
AAGCGTTGGAATTGGGGCAGTTAATTTCCAAACTGAGAGACGTCACCTAATGGCCCTGCC
TTGGCTGACCCACAGTGACTCAGAGAACCAGGCCTGCTGCCCATTTTAAAACCCGTGAAC
TAGCAAAGCATAAAAGCCAGCTGGAAGAGACTGACCTTTCTTTCTTTTTTGTTTTTTCTG
TCTTGGGGGACCTGACCCTCCTCCTGTCCTGGCCTTCTGTCCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTGACATGTAACATCATGTACGTGTAAAGAGTACAACATGGTGATTTGATTTGTCCTTA
GGTGTTTACCAGGGCACGTGGCCAGTGCTCACGAGTTCTCCCTGAGCACTGGAGGCCTGG
AGTGTCACAATCGTGCCTGGTCAGGGCGGTGGGGCGGTAGCAGGTCGTGGGAACCAGAGA
CTTAAGTTTTCTGTCTCTGCGGTAGGAGGGTCCTCCTGGTAGAGGAAGACGGCCTCCCCA
CCGCAGGGAGCTGGTGCTGGGCTGAGCCAATAATCAGCAGCCTCAGCTTCCAGGGACTTC
TTGGGAAAGAAACAAACAAACAAAAAAATGGTGTTAATTAAAAAACAGCACCACCAAAAT
TCAATCCCATAATTCCTTTTTTTTGAAAAAATAACGTTCTCAACTCTCGGATCCTATGGA
TACTTAGCATAGCATGATCCTTCCCAGGCTTGCAGCTTTAAAACCTGCCCGGTCGTCTCC
GTGCCTGTCAGGGAGAGCTAGAGATCCCCCTGCTGCCCCACCCGGACCTGGTGGCCGGCG
AAGCGTTGGAATTGGGGCAGTTAATTTCCAAACTGAGAGACGTCACCTAATGGCCCTGCC
TTGGCTGACCCACAGTGACTCAGAGAACCAGGCCTGCTGCCCATTTTAAAACCCGTGAAC
TAGCAAAGCATAAAAGCCAGCTGGAAGAGACTGACCTTTCTTTCTTTTTTGTTTTTTCTG
TCTTGGGGGACCTGACCCTCCTCCTGTCCTGGCCTTCTGTCCCCA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-342, + strand, RNAz p=0.998306

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-342, + strand, RNAz p=0.998306

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-763, gnl|bosTau2|chr9 (21785702-21786466)
               

               
               1-763, gnl|Hg17|chr15 (68144624-68143869)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-763, gnl|bosTau2|chr9 (21785702-21786466)
               

               
               1-763, gnl|Hg17|chr15 (68144624-68143869)

	1-763, gnl\|bosTau2\|chr9 (21785702-21786466)
	1-763, gnl\|Hg17\|chr15 (68144624-68143869)