Non-Coding RNA Search

Lng1-LNG010099D01

Sequence:


               
               TGGATCACCTTTTTCTCAAAGAGGCATATCCTGACCACACTTTTTGTAATTGCCATCATC
TCGCTTTGCTTTCTTTTTTGTAACACTCCCTTCTGAAATTCTGCATTTACTTAGCATATT
TACATCTTTACTATACTTATTGTCTGCTAATTACTAGGATATAAGCTTCATGAAAGTGGA
TATCTTTGTTTTGTTCATCAGTGTATGAACAAAGTGCAAAGAAAGTGCCTAGTGCATCAC
AGGCACTCAGTAAATATTTGTTGAATGGCAGTAGCTCTTAGCTGTAAAAAGGTAGGGTAC
AAAAGTTAAGGATTCCATAAAATAAAAAAAGAATGGCTCCAGAGTTTTTACTAGATCCTA
GATAATGCCTTTAACTAGTAAGGATTTTGGTGAGATATTGAGGGGAAATGAATTCTGGTT
TGAGCATGTTGAGTTTGAGGTGAAAGTAGGATAGGCAAATGAAATTGTTCAATACAGCAA
AAGACTGGAATGGGAGAGGACCTTAGGCAGAGAAATGATTTTGCCTTCCGGCTCATTCTC
TTTCTTTTGGATTCTTGTGCCCCTAAAACCACCTACAGTGGAGTATTTATTTTGACTGAA
TTCCTAGCTTAGATCTGGAGTCTTGCTCAGTTAACTGTTAAATTATTCCCTCCTGGGTTA
CCGGTCCATGTTTTGTTACCTGCCTCCTTCCCACCCCCATTCCTCCTGAGCCAAATAATG
TATTTAGATTTATTTGTGGTCTTCTGATTCTATTGAAATTAGCCTTCAggagttcccgtc
gtggcgcagtggttaacgaatccgactaggaaccatgangttgcggg

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGATCACCTTTTTCTCAAAGAGGCATATCCTGACCACACTTTTTGTAATTGCCATCATC
TCGCTTTGCTTTCTTTTTTGTAACACTCCCTTCTGAAATTCTGCATTTACTTAGCATATT
TACATCTTTACTATACTTATTGTCTGCTAATTACTAGGATATAAGCTTCATGAAAGTGGA
TATCTTTGTTTTGTTCATCAGTGTATGAACAAAGTGCAAAGAAAGTGCCTAGTGCATCAC
AGGCACTCAGTAAATATTTGTTGAATGGCAGTAGCTCTTAGCTGTAAAAAGGTAGGGTAC
AAAAGTTAAGGATTCCATAAAATAAAAAAAGAATGGCTCCAGAGTTTTTACTAGATCCTA
GATAATGCCTTTAACTAGTAAGGATTTTGGTGAGATATTGAGGGGAAATGAATTCTGGTT
TGAGCATGTTGAGTTTGAGGTGAAAGTAGGATAGGCAAATGAAATTGTTCAATACAGCAA
AAGACTGGAATGGGAGAGGACCTTAGGCAGAGAAATGATTTTGCCTTCCGGCTCATTCTC
TTTCTTTTGGATTCTTGTGCCCCTAAAACCACCTACAGTGGAGTATTTATTTTGACTGAA
TTCCTAGCTTAGATCTGGAGTCTTGCTCAGTTAACTGTTAAATTATTCCCTCCTGGGTTA
CCGGTCCATGTTTTGTTACCTGCCTCCTTCCCACCCCCATTCCTCCTGAGCCAAATAATG
TATTTAGATTTATTTGTGGTCTTCTGATTCTATTGAAATTAGCCTTCAggagttcccgtc
gtggcgcagtggttaacgaatccgactaggaaccatgangttgcggg

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               157-270, + strand, RNAz p=0.802941

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               157-270, + strand, RNAz p=0.802941

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               5-682, gnl|bosTau2|chr8 (34853634-34852943)
               

               
               5-682, gnl|Hg17|chr9 (98954207-98955491)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-682, gnl|bosTau2|chr8 (34853634-34852943)
               

               
               5-682, gnl|Hg17|chr9 (98954207-98955491)

	5-682, gnl\|bosTau2\|chr8 (34853634-34852943)
	5-682, gnl\|Hg17\|chr9 (98954207-98955491)